Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00879 ATGGGCTATGTTCATATTGATGACGTAGCACGCTCCCACGTCCTTGTTTATGAAGATGCCAATGCTCAAGGAAGATATCTTTGTAGCTCAGTAGTCTTGGGCAATGAAGAGTTAGCATACTTGTTGGCGAAGCGCTATCCATCCTTACCTATACCTAAGAGGTTTGAGAAACTTAACAGACCATATTACGAGTTTAATACATCGAAGATGAAGAGCTTGGGTGTCAAATTCAAAGGGATAGAAGAAATGTTTGACGATTGCATTGCATCACTCAAGGAGAAAGGCCATGATCTTGTTTAG 300 0.41 MGYVHIDDVARSHVLVYEDANAQGRYLCSSVVLGNEELAYLLAKRYPSLPIPKRFEKLNRPYYEFNTSKMKSLGVKFKGIEEMFDDCIASLKEKGHDLV* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00879 99 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 95 IPR036291 -
Eupl13g00879 99 Gene3D - 1 98 - -
Eupl13g00879 99 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00879 Eupl-Chr13 13148504 13149444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00879 1 96 Monolignol Biosynthesis Gene Families AT1G15950 38.384 5.08e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00879 - - qsu:112003056 161.77