Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00878 ATGACAGTTGATACACCACCTGTCATGGCCCAGAGCATAAAAAGCAGACGATCTTCCTTCAGCTCTAGCAATGGCAATGTCACTCCTTTGAGTAGCTCCGCCGCCATCCCCAATGGAGATGACTATGACAGTGATGGTTCCAATTTTGCACCTCTTACCCCGATGACTCTGTCAATGTCTATTCCGGCAGAGCTGGCAGGTGCTATACCCTTGATTGATAGATTCCAGGTAGAGGGTTTTTTGAGGTCCATGCAGAAACAGATCCAATCAGCTGGAAAACGTGGATTTTTTTCAAAAAGATCTGTAGGCCCTCAAGTTCGGGAAAAATTTACTTTTGAGGATATGCTATGTTTTCAAAAGGATCCTATTCCAACTTCATTGCTTAAAATTAATAGTGACCTGGTAAGCCGCGCGACAAAATTGTTTCAGATAATTTTGAAGTATATGGGAGTTGATTCATCAGATAGAGTAACTCCTCTGAGCTTAGAAGAACGGATTGCGCTTGTTGAAAAACTGTATAAGCAAACTTTGAAGCGTTCTGAACTTCGAGACGAACTTTTTGCACAGATTTCAAAGCAAACACGCCACAACCCTGATAGGCAATACTTGATTAAAGCTTGGGAGCTAATGTATTTATGTGCATCTTCCATGCCTCCTAGTAAGGACATTGGGGGATATTTGTCAGAGCACGTTCATTGTGTAGCTCATGAGGTGAATACTGATTCTGAAGTTCAAGTCCTTGCATTGAATACACTAAACGCTTTGAAGCATTCTGTTAAGGCTGGACCTAGACAAACAATTCCTGTGCGTGGGGAGATTGAAGCTTTTTTGACTGGTAAAAAGCTTACAACCATAGTGTTTTTCTTGGATGAGACTTTTGAAGAAATTACATATGATATGGCAACAACCGTCGCTGATGCTGTTAAGGAACTTGCTGGGATAATTAAACTATCAACATATTCTAGTTTCAGTCTATTTGAATGCCGTAAAGTTCTCACTGGTTCTAAATCACCTGACCCTGGAAACGAGGAATATGTTGGGTTGGAAGACAACAAATACATTGGGGATTTGCTGGCAGAATTCAAGGCAGCTAAAGATCGTAGTAAAGGAGAGATCTTGCATTGCAAATTGACATTCAAAAAGAAGTTATTTCGGGAGTCAGATGAAGCTGTAGAAGACCCAATGTTTCTGCAGTTATCCTACGTGCAGTTGCAACATGATTATATCTTGGGGAATTATCCTGTTGGAAGGGATGATGCTGCACAGCTGTCCGCATTGCAAATCTTGGTAGAGATAGGATTCGTTGACAGTCCTGAATCATGCACTGACTGGACTTCACTTCTTGAAAGATTCTTACCTAGACAAATTGCAATTACTCGAGCAAAGAGGGACTGGGAGCTAGATATTCTTTCTCGGTATTGTTCAATGGAACGTTTGTCAAAGGACGATGCAAGACAACAATTCCTTCGGATCTTGAGAACACTTCCTTATGGGAACTCTGTTTTCTTTACCGTTCGAAAGGCTGAGGATCCCATTGGCCTTCTGCCTGGTCGGATCATTTTAGGCATCAATAAACGTGGGGTTCATTTTTTTCGTCCAGTTCCAAAAGAGTATTTGCATTCAGCTGAATTAAGAGATATAATGCAATTTGGTAGCAGCAATACAGCTGTATTTTTCAAGATGAGAGTTGCAGGACACCTCCACATATTCCAATTTGAAACTAAGCAGGGGGAGGAAATTTGTGTTGCTCTTCAAACACATATAAATGACGTAATGCTACGCAAGTACTCCAAAGGGCGGCCTGCTGCTAGTGGCTCCACCAATGGAGATATTTCTCAGAACCTTAACCCACCCAGTCTGGATGTTTATGAGAAACGTGTCCAGGAGTTGTCTAAAGCTGTTGAAGAATCTCAAACGAATGCTGATCGATTTTTGGAAGAGTTGCGTGAAAAGCAAAAGCAAGAAGTAGAAATGCAGGAGGAACTGGAAGGGTTGAAGGATTCTCTGAGATCCGAGAAGCAAAACTTAGCAGAAGTTACATGTGACTATGATAAACTAAGAGCACTATGTGATGAAAAAGATTCTGCTCTGCAGGCTGCACTTTTGGAAAAGAGCAGCATGGAAGTAAGATTGGCAAGGATGGGTAATCAAGGGCACTCCTCTTTAGAGAACAGTGCCAGAAACGATTTATTTGGACCTAGTAATCAGGCTCTAAATAAGCTCCAAGAGGAATTGAAAGTGCGCACAGAGGAGCTGCATGCAGCAGAAGAAACTGCAAAGAGATTGGCAAATGAAAAGCTATTATTGGAACAAAGAAATAAAAGGCTTGAGAAGGAGAAATCCAGCGAGACGGAAATTCTTGAGAGAAACTTTGAACAAGAACGCAGAACCCTTAGGCTACGAGTTTCTGAACTGGAAAAGAAACTGGAACAGGTTACACAAGATTTGGCCATTGCGCAGACTACTCTTACAATTAGAAATACAGAGTTGGATACATTGCAAAATAATTTTAAAGAATTAGAGGAACTGCGAGAAATGAAAGAGGATATTGATAGAAAGAATGAGCAAACTGCTGCTATTCTAAAGAAGCAAGGGGCTCAATTGATTGAATTAGAAGCACTTTACAAGGAGGAACAAGTCTTAAGGAAGCGATATTTCAATACCATAGAAGATATGAAAGGCAAGATCAGAGTATTCTGCCGGTTGCGGCCTCTTAGTGAAAAAGACATTTCTGTGAAAGAAAGGAGTGTTCTTGCACATCTTGATGAGTTCACAGTTGAACATCCTTGGAAGGATGATAAGATAAAGCAACACCTTTATGATCGTGTCTTTGATGGCACTTCTTCTCAAGAAGATGTTTTTGAGGATACAAAGTATTTAGTGCAATCTGCCGTTGATGGATATAATGTGTGCATATTTGCATATGGCCAAACTGGTTCGGGAAAAACATTCACAATTTATGGATCCGAGAGCGATCCAGGGCTCACTCCAAGAGCAACTGCTGAACTTTTCAAAATTTTAAAGCGTGACAGCAACAAATTTTCATTCTCTTTAAAGGCGTATATGGTGGAGTTATATCAGGATACACTTGTAGATCTTCTATTACCAAAGAATGGAAAGCGTTTGAAGCTCGATATTAAAAAGGATTCAAAGGGGATGGTATCTGTAGAGAATGTGACAATTGTACCTATTTCAACCTTTGAGGAACTGAAAAATATTATATTGAAGGGGTCTGAGAAGCGACACACATCTGGGACTCAAATGAATGAAGAAAGTTCAAGATCTCACCTGATACTTTCAATCGTTATTGAAAGTACTAACCTTCAAACTCAATCTGTTGCCAGAGGAAAGTTAAGTTTCGTGGATCTTGCTGGCTCAGAAAGAATAAAGAAATCAGGCTCTTCAGGGAATCAACTAAAAGAAGCCCAGAGTATCAACAAATCACTTTCAGCCCTTGGGGATGTGATCAGTGCTTTGTCTTCTGATGGTCAGCACATACCCTACAGAAATCACAAGTTGACTATGCTCATGAGTGACTCGCTCGGTGGAAATGCCAAGACACTTATGTTCGTAAACGTCTCTCCAGCTGAGTCGAACTTGGACGAAACACATAATTCTCTAACGTATGCGTCAAGAGTCCGGTCGATTGTGAATGATCCGAGTAAAAACGTTTCGTCAAGGGAAGTCGCCCGTTTAAAGAAATTGGTTGCTCACTGGAAGGAACAAGCGGGCAAGAGGGGTGATGACGAAGAACTTGAAGAGATCCAAGATGAATGCCTAGCAAGAGAGAGGACAGATGGTCGACATTCGATGTATGCATCTATTATTTGA 3831 0.4098 MTVDTPPVMAQSIKSRRSSFSSSNGNVTPLSSSAAIPNGDDYDSDGSNFAPLTPMTLSMSIPAELAGAIPLIDRFQVEGFLRSMQKQIQSAGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKINSDLVSRATKLFQIILKYMGVDSSDRVTPLSLEERIALVEKLYKQTLKRSELRDELFAQISKQTRHNPDRQYLIKAWELMYLCASSMPPSKDIGGYLSEHVHCVAHEVNTDSEVQVLALNTLNALKHSVKAGPRQTIPVRGEIEAFLTGKKLTTIVFFLDETFEEITYDMATTVADAVKELAGIIKLSTYSSFSLFECRKVLTGSKSPDPGNEEYVGLEDNKYIGDLLAEFKAAKDRSKGEILHCKLTFKKKLFRESDEAVEDPMFLQLSYVQLQHDYILGNYPVGRDDAAQLSALQILVEIGFVDSPESCTDWTSLLERFLPRQIAITRAKRDWELDILSRYCSMERLSKDDARQQFLRILRTLPYGNSVFFTVRKAEDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGHLHIFQFETKQGEEICVALQTHINDVMLRKYSKGRPAASGSTNGDISQNLNPPSLDVYEKRVQELSKAVEESQTNADRFLEELREKQKQEVEMQEELEGLKDSLRSEKQNLAEVTCDYDKLRALCDEKDSALQAALLEKSSMEVRLARMGNQGHSSLENSARNDLFGPSNQALNKLQEELKVRTEELHAAEETAKRLANEKLLLEQRNKRLEKEKSSETEILERNFEQERRTLRLRVSELEKKLEQVTQDLAIAQTTLTIRNTELDTLQNNFKELEELREMKEDIDRKNEQTAAILKKQGAQLIELEALYKEEQVLRKRYFNTIEDMKGKIRVFCRLRPLSEKDISVKERSVLAHLDEFTVEHPWKDDKIKQHLYDRVFDGTSSQEDVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSESDPGLTPRATAELFKILKRDSNKFSFSLKAYMVELYQDTLVDLLLPKNGKRLKLDIKKDSKGMVSVENVTIVPISTFEELKNIILKGSEKRHTSGTQMNEESSRSHLILSIVIESTNLQTQSVARGKLSFVDLAGSERIKKSGSSGNQLKEAQSINKSLSALGDVISALSSDGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETHNSLTYASRVRSIVNDPSKNVSSREVARLKKLVAHWKEQAGKRGDDEELEEIQDECLARERTDGRHSMYASII* 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00878 1276 Coils Coil 620 689 - -
Eupl13g00878 1276 FunFam Kinesin-like calmodulin binding protein 385 496 - -
Eupl13g00878 1276 PRINTS Kinesin heavy chain signature 967 988 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl13g00878 1276 PRINTS Kinesin heavy chain signature 1117 1135 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl13g00878 1276 PRINTS Kinesin heavy chain signature 1086 1103 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl13g00878 1276 PRINTS Kinesin heavy chain signature 1166 1187 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl13g00878 1276 Gene3D - 394 495 IPR014352 -
Eupl13g00878 1276 Pfam MyTH4 domain 170 275 IPR000857 GO:0005856
Eupl13g00878 1276 Pfam Kinesin motor domain 901 1216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl13g00878 1276 ProSiteProfiles Kinesin motor domain profile. 895 1216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl13g00878 1276 ProSiteProfiles FERM domain profile. 282 596 IPR000299 GO:0005856
Eupl13g00878 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 895 1243 IPR027417 -
Eupl13g00878 1276 PANTHER MYOSIN VII, XV 7 901 - -
Eupl13g00878 1276 SMART B41_5 278 502 IPR019749 -
Eupl13g00878 1276 SMART MyTH4_1 118 277 IPR000857 GO:0005856
Eupl13g00878 1276 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 281 384 - -
Eupl13g00878 1276 MobiDBLite consensus disorder prediction 1 38 - -
Eupl13g00878 1276 CDD FERM_B-lobe 397 495 IPR019748 -
Eupl13g00878 1276 Gene3D Kinesin motor domain 882 1218 IPR036961 -
Eupl13g00878 1276 CDD FERM_C_KCBP 499 605 - -
Eupl13g00878 1276 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 500 609 - -
Eupl13g00878 1276 SUPERFAMILY Prismane protein-like 838 898 IPR011254 GO:0003824|GO:0016491
Eupl13g00878 1276 SUPERFAMILY Second domain of FERM 380 497 IPR035963 -
Eupl13g00878 1276 Pfam FERM central domain 388 502 IPR019748 -
Eupl13g00878 1276 Gene3D - 500 608 IPR011993 -
Eupl13g00878 1276 SUPERFAMILY PH domain-like 502 590 - -
Eupl13g00878 1276 Coils Coil 738 779 - -
Eupl13g00878 1276 Gene3D - 281 385 - -
Eupl13g00878 1276 SMART kinesin_4 893 1224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl13g00878 1276 Gene3D MyTH4 domain 97 278 IPR038185 -
Eupl13g00878 1276 Coils Coil 788 863 - -
Eupl13g00878 1276 CDD KISc_C_terminal 893 1218 - -
Eupl13g00878 1276 Gene3D - 1219 1267 - -
Eupl13g00878 1276 ProSiteProfiles MyTH4 domain profile. 118 277 IPR000857 GO:0005856
Eupl13g00878 1276 FunFam Kinesin-like calmodulin-binding protein 839 1218 - -
Eupl13g00878 1276 ProSitePatterns Kinesin motor domain signature. 1116 1127 IPR019821 GO:0003777|GO:0005524|GO:0007018
Eupl13g00878 1276 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 97 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00878 Eupl-Chr13 13122640 13136550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00878 28 1266 Calmodulin-binding Proteins AT5G65930 74.541 0.0 1880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00878 - - msin:131222300 2071.97