Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00877 ATGGCGTCCTCGAAGGCAGGTCTTCTGGATTCATCTGGAGCAAACTCTTATGCATCTTCATCATCTGCCATGGATCTATCCAATAATAGAGATCAACGGCAATCGATTGAAATATTTGAACCATCGAATTATGTCAGACAACCCAGTGAGAGTAAAGAGATAGAAAGCGAGACTGCATCTCAGCCGCACGAGGAAGAATCAAGAACATCCTCTGTTAGGGAACCTGTCGATACGTGGATGGCATTTGCAAGAGAGTCTGAGAAGTATAAGACCACAGGTGACTCTGAACCAGGTTTGAGTGGGATTACACAGAGACAGAATGATTTCTTGGTGGAGTCCAGTGAAGCTCGTGGACACCCATCAAATGGCCAATTTAATCAGACTGTAAGTGTAGCTAGCATGGCTGAAAGGGCTAGTGAATGGGGACTGATAATTGAGTCAGAAATTGGAGCAGATAATGCCCAAGCCGTGCGCCTAAGGCCATCATCAGGAGAGAGAAGTAAAAATTCAACAGAGAGATCTATGGATTATAGACGCACATCCAAAGAATCAAATTCTGGATTTGAATTCAGCGTCCCTAGGGTCTCTCAAGAGCTGAAGGATGCACTGGCCACACTCCAACAGACATTTGTTGTGTCAGATGCGACCAGTCCGGAGTGCCCTATAATGTATGCCAGTGCTGGGTTTTTCAGTATGACTGGTTATTCTTCAAAGGAGGTTATTGGAAGGAACTGTCGCTTTCTTCAGGGACCTGATACAGATCAGAATGAAATTGAAAAAATACGAGTGGCCGTCAAAACTGGGAAAAGCTACTGTGGCAGGCTCTTGAATTACAAGAAGGATGGCACACCTTTCTGGAATCTTCTAACCATCACACCCATAAAAGATGAAACTGGGAGGGTTATCAAATTTATAGGAATGCAAGTTGAGGTCAGCAAATATACAGAAGGTCTGAATGACAAGGCTTTGCGACCAAACGGCTTGCCAAAGTCCCTAATTCGCTACGATGCTCGTCAGAAGGAGAATGCCTTATGTTCAATCACTGAGGTTGTCCAGACTGTGAAGCATCCACGAGTTCATATTCAAGCCACAGATCCCAGCACCCCTGGCAAGCTTGAGGAGCATGAGAAGTTTAACCTTGATTACTTTCTGCCAAAATCTGTAGAACTTGAGAACCTAAGTGCACATGGTAGACAAACTCCTCTAATGGATGCCAGAAGTATATCCAGAACAAGTTCTACTGGTGATGCTAGCAAGAAGTTTAGAAAGTCAGGACGCATTTCATTGATGGGGTTTAAAGGGAGGTCTCAAAGCTCTGCAGAAAGGAATGATCCTCAGCCTAATATTGAGCCAGAGGTTCTGATGACTAGAGATGTACAACGCTCTGACAGCTGGGATTGCTTGGAAAGAGAAAGGGATATACGCCAAGGATTTGACTTAGCGACGACATTGGAACGCATTGAAAAGAATTTTGTCATTACAGATCCTAGACTTCCTGATAACCCCATTATTTTTGCATCTGATAGCTTTCTTGAACTGACAGAGTATACTCGGGAAGAAATTTTGGGAAGAAACTGCAGATTTCTTCAAGGCCCTGATACGGATCAAGGAACTGTCTCAAAAATAAGAGATGCTATCAGAGAACACAGAGAAATCACCGTCCAGTTGATTAACTATACAAAGAGCGGGAAGAAGTTTTGGAATTTATTCCACTTGCAACCTATGCGTGACCAAAAGGGCGAACTTCAATACTTCATTGGTGTGCAATTAGATGGAAGTGATCATGTAGAACCCCTTCGAAACCGCCTCTCGGAGAAAACTGAGCAGCAAAGTTCTAAGTTGGTCAAAGCTACTGCAGAAAATGTTAATGAAGCTGTTCGAGAGCTTCCAGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATCCATTCTCGACATGTGTTTCCAAGGCCTCACAAAAAGAATAATTCTTCTTGGATAGCGATTCAAAAGATCATTGCGCGTGGTGAGCGAATTGGTCTGAAGCATTTCAAGCCCATAAAACCTTTGGGTTGTGGTGATACTGGCAGTGTTCATTTGGTGGAATTGCAAGGTACAGGTGAATTGTACGCTATGAAGGCGATGGACAAAACTGTAATGTTGAATCGTAACAAGGTTCATCGGGCATGCATTGAGAGGGAAATCATTTCGCTGTTGGATCATCCTTTTCTTCCTACGTTATACACTTCTTTTCAGACCGCTACACACGTTTGTTTGATAACAGACTTTTGCCCTGGTGGGGAGCTGTTTGCGTTGCTAGACAAGCAGCCTATGAAGATTTTTAAAGAGGAATCTGCGAGGTTCTACGCCGCAGAAGTCATAGTTGGCTTGGAATATCTTCATTGTTTAGGAATAATCTATCGAGACCTGAAACCTGAAAATGTGTTACTCCAAAAGGATGGGCATGTCGTATTAACTGACTTTGATCTATCATTTTTGACAGCCTGCAAACCCCAAGTTTTAAAGCATCCATTGCCTGCGAAGAGAAGAAGATCTAGAAATCAACCACCTCCAACATTTGTTGCAGAACCCATTACACAATCAAATTCATTTGTTGGAACCGAAGAGTACATTGCTCCTGAAATTATTACGGGTGCAGGCCACAGTAGTGCTATTGATTGGTGGGCTCTTGGTATTTTGCTGTATGAGATGCTTTATGGCCGTACACCTTTTAGGGGAAAGAACAGGCAGAAAACATTTGGGAACATTCTGCACAAAGACCTCACCTTTCCAAGTAGCATCCCGGTGAGCCTTGCAGCTAGGCAATTGATCCATGGATTATTGAATAGAGACCCTGCAAACCGTTTAGGATCAAACACTGGTGCCAATGAAATCAAACAACACCCCTTCTTCCGTGGAATCAATTGGCCCCTCATCCGTTGCATGAGCCCACCACCATTAGACGTGCCTCTTCAAATAATTGGGAAAAAAACAAGTTCAAAGGCTACGGATGGACAGTGGGGAGATGAGGGAATGCTTGTTCAGTCATTGGACATTTTTTAA 3042 0.4349 MASSKAGLLDSSGANSYASSSSAMDLSNNRDQRQSIEIFEPSNYVRQPSESKEIESETASQPHEEESRTSSVREPVDTWMAFARESEKYKTTGDSEPGLSGITQRQNDFLVESSEARGHPSNGQFNQTVSVASMAERASEWGLIIESEIGADNAQAVRLRPSSGERSKNSTERSMDYRRTSKESNSGFEFSVPRVSQELKDALATLQQTFVVSDATSPECPIMYASAGFFSMTGYSSKEVIGRNCRFLQGPDTDQNEIEKIRVAVKTGKSYCGRLLNYKKDGTPFWNLLTITPIKDETGRVIKFIGMQVEVSKYTEGLNDKALRPNGLPKSLIRYDARQKENALCSITEVVQTVKHPRVHIQATDPSTPGKLEEHEKFNLDYFLPKSVELENLSAHGRQTPLMDARSISRTSSTGDASKKFRKSGRISLMGFKGRSQSSAERNDPQPNIEPEVLMTRDVQRSDSWDCLERERDIRQGFDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPDTDQGTVSKIRDAIREHREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSSKLVKATAENVNEAVRELPDANLRPEDLWAIHSRHVFPRPHKKNNSSWIAIQKIIARGERIGLKHFKPIKPLGCGDTGSVHLVELQGTGELYAMKAMDKTVMLNRNKVHRACIEREIISLLDHPFLPTLYTSFQTATHVCLITDFCPGGELFALLDKQPMKIFKEESARFYAAEVIVGLEYLHCLGIIYRDLKPENVLLQKDGHVVLTDFDLSFLTACKPQVLKHPLPAKRRRSRNQPPPTFVAEPITQSNSFVGTEEYIAPEIITGAGHSSAIDWWALGILLYEMLYGRTPFRGKNRQKTFGNILHKDLTFPSSIPVSLAARQLIHGLLNRDPANRLGSNTGANEIKQHPFFRGINWPLIRCMSPPPLDVPLQIIGKKTSSKATDGQWGDEGMLVQSLDIF* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00877 1013 SUPERFAMILY PYP-like sensor domain (PAS domain) 216 312 IPR035965 -
Eupl13g00877 1013 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Eupl13g00877 1013 SMART pas_2 478 547 IPR000014 -
Eupl13g00877 1013 SMART pas_2 197 266 IPR000014 -
Eupl13g00877 1013 CDD STKc_phototropin_like 675 987 - -
Eupl13g00877 1013 SMART serkin_6 677 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00877 1013 Pfam PAS domain 499 591 IPR000014 -
Eupl13g00877 1013 Pfam PAS domain 216 312 IPR000014 -
Eupl13g00877 1013 NCBIfam PAS domain S-box protein 221 312 IPR000014 -
Eupl13g00877 1013 NCBIfam PAS domain S-box protein 501 594 IPR000014 -
Eupl13g00877 1013 FunFam LOV domain-containing protein 676 760 - -
Eupl13g00877 1013 SUPERFAMILY Protein kinase-like (PK-like) 653 987 IPR011009 -
Eupl13g00877 1013 Gene3D Transferase(Phosphotransferase) domain 1 761 973 - -
Eupl13g00877 1013 FunFam Putative LOV domain-containing protein 209 365 - -
Eupl13g00877 1013 CDD PAS 491 591 IPR000014 -
Eupl13g00877 1013 PANTHER FLIPPASE KINASE 1-RELATED 163 981 - -
Eupl13g00877 1013 ProSiteProfiles PAS repeat profile. 195 268 IPR000014 -
Eupl13g00877 1013 SMART pac_2 272 314 IPR001610 -
Eupl13g00877 1013 SMART pac_2 553 595 IPR001610 -
Eupl13g00877 1013 Gene3D Phosphorylase Kinase; domain 1 676 760 - -
Eupl13g00877 1013 FunFam LOV domain-containing protein 465 629 - -
Eupl13g00877 1013 FunFam Putative LOV domain-containing protein 761 976 - -
Eupl13g00877 1013 MobiDBLite consensus disorder prediction 50 72 - -
Eupl13g00877 1013 MobiDBLite consensus disorder prediction 1 49 - -
Eupl13g00877 1013 ProSiteProfiles PAS repeat profile. 480 549 IPR000014 -
Eupl13g00877 1013 MobiDBLite consensus disorder prediction 155 183 - -
Eupl13g00877 1013 ProSiteProfiles Protein kinase domain profile. 677 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00877 1013 MobiDBLite consensus disorder prediction 1 77 - -
Eupl13g00877 1013 Gene3D PAS domain 465 629 - -
Eupl13g00877 1013 CDD PAS 222 311 IPR000014 -
Eupl13g00877 1013 ProSiteProfiles PAC domain profile. 550 604 IPR000700 -
Eupl13g00877 1013 ProSiteProfiles PAC domain profile. 269 323 IPR000700 -
Eupl13g00877 1013 MobiDBLite consensus disorder prediction 165 183 - -
Eupl13g00877 1013 SUPERFAMILY PYP-like sensor domain (PAS domain) 492 591 IPR035965 -
Eupl13g00877 1013 Gene3D PAS domain 209 365 - -
Eupl13g00877 1013 Pfam Protein kinase domain 679 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00877 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00877 Eupl-Chr13 13057796 13112901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00877 132 1012 AGC Kinase Gene Family AT5G58140 72.285 0.0 1287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl13g00877 Pkinase 2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00877 K20715 - nnu:104606902 1543.1