Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00874 ATGAATAGCCAAAGTAGAGAATGCCAACTCGAACTTAATGACATCAATGATCAATCGTGTGAACAGTCAGATTCAGAGAGTGAGGATGAAGTTGTCCAAGATTCCTTGCATATGGAATTGCAAACAGGAGGGGATCATCCAGCAGCAATGGAATCTCAAATTTCAAAGGATTTTGGGGGTGAGGTACCAATACTTGGCATGGTATTCCATTCAGAGAATCAAGCGTATAATTTTTACAATGATTACGCCGGATCTGTGGGATTTAGTATACGTAAGCAATGGGCGACAAAACGTAAAACGGATAAGAAAATCCTCAAAAGGATTTTTTGTTGTTCTAATGAAGGTGTCCGTGGTAGTCATACAAGGGGGCCGCCAAAGAAAGCGCGGCCTGAGTCACGAACCAATTGTAATGCACGTATTGTGATCAAATTACAAGAAGATGGGAATTATGTTGTGATAGAGTTTATAGAAGAACATAATCACGAGCTTGCACCTCCGTCTAAAGTGCATATGTTGAGATCGCAGCGAAAGACACAAGATGCCCATGCTAGATTAATCGGCAATACGCACTGTGCAGGGATAGGATCCACTAATATTTTGTCATGTACACACGCAGAAGGTGGAGGGTCTCAAAACTTCAATGTTGTGCAAGTGGATTGCAATAATGACTTGCAAAGAAAGCGCAATGAAATTTTGAAGAAGGGAGATGCACAGGTTCTTTTAGATTACTTCAAGCACATGCAGAGCAAGGATCCATGTTTCTTCTATTCAATACAAATGGATGAGGACAACCAAATGTGCAGTTGCTTTTGGTGCGATGCTAAGTCAAGGATCGACTATAGCTTCTTCGGTGATGTGGTGTGCTTTGACACGATATATAAACTGAATGGGAATGATATTTCATTTGCATCGATTATTGGAGTGAACAATCATGGACACTCTACCCTCTTTGGTTGTGCTTTGTTGTTGGATGAGACCACAGAGTCACTCGTATGGTTATTTGAAACATTTTTGGATGCAATGTATAGAAAACAACCAAAAACAATTTTTACAGACCAGGCCATGCCGATTGCCGAAGCAATTAAACGGGTGTTGCCAAATACGTATCACCGTCTATGTTTATGGCATATTTATCAAAATGCTTTGAAGCACCTCTCTTTTGTGTTCGAAGCATTTACTTCTTTCACGATAGATTTTAAGAGTTGCATATACGGTAATGAAACAGAAGAGGAGTTTCAATCAAGTTGGGACACACTACTTGAAAAGTACAATTTAGTGGGGAATGGATGGCTACAAGATTTATACCAGATGCGTGAGAAATGGGCACAAGCGTATGGACGGGAGTACTTCTGTGCAGGTGTAATGACTACTCAAAGAAGTGAAGATTTAAATAACTATTTCATGAAGTATTTCAAGGTCACCCTATCCCTACAAGAGTTCATAACTCAATATGAGGAAGCAGTTACCAGACGGCGAGAGAAGGAGAAAATAGAAGAATTTAATTTTAGAAAATCAAAACCAAACTTGCTGACAGAGTGGACAGCCGAAGAGCGAGCAGCAGCAGTGTACACAAGAAATATATTCAGTTCTTTCCAAAAAGAGTACCTAGGTTGTATGGATTTGTTTCTACAATCTGATGGTGAGGATGGGACATTGTACACATACAAGGTTTCATCCTATCGTGGTTACAAGCCTCGCACTGTTACATTTGATTGTTCAAACAGCACAGTGAAGTGTAGCTGCAAAAAATTTGAATTCACAGGGATTTTATGTGCTCATGCGTTAAAAATATTACATAGCAGGGAGTTGCCCGATATCCCATCCCAATACTATCTGAAAAGGTGGACCAAAGATGCAACAACCGGTGTTGTAATTGACGATTTTAGAAAAACCGTGCAGGTTGATTGTCAACCGTCCTTGACTTTGCGATATAGTGAGTTGGCCCACATAGCCCTAACTCTAGCTGTGAAAGGTGCTAGAACTGAAAAATCTGGTGAGCTAGTTAAACGTGAACTAACTCGGCTGTTAGAGGAAATAGATTACTGTCTTAAAATTGACTCGGATCAGCCTATACCTCATGAAGATTTCATTAGTGCAAATTATGATAATGTTGGTGAAGTGGGTATTGCGGATCATTTAAGTGGTGGAATCAAGCATCCATTAGAGAAGGCAAGAGGTACCAGAGGACAAAGTGGTCAGGTATCAGTTGGAGGGATTAGAAAACCACCTTTCATACTGCCTATGGTACCTAACATCCCAATGTTCCCTTTCAATCCAGCCAGACCCATGAATATGCCCCACTACACTCAGGGATCAATCGGGCTAGTAGAGCAGTCAATGTTACGCCCTAGCACTGATAGCATACAGTATGGACAAATGTCGGGTGGATGGAGTGCACAACCATTGTGGCATGGCTGCTTTCTCCCACTGAATGTTGTTGGATGCCCAAGTGCTTCAAGCATCCAGGGTCTCTCTTTCCGTGCAGCTGGACCTTCGAAAATCCCTTTGATGCCATATGTTTATACTCAGGGATCAGTCAGGCATTTAGACCAAGCGACAACACAACATGGCACCAAGTCCAGCCAGGTAGACATTTTCTATGGATACTCATCATCTAGATTGAATTATATCAGCTCAATACATATGCATTTGATGTTGTGCAGGGTCAACAGTCGTCTGCACATAGACCATCAGAACCATCGACGCAACAGTGTCCAACACATAAATTAG 2730 0.4136 MNSQSRECQLELNDINDQSCEQSDSESEDEVVQDSLHMELQTGGDHPAAMESQISKDFGGEVPILGMVFHSENQAYNFYNDYAGSVGFSIRKQWATKRKTDKKILKRIFCCSNEGVRGSHTRGPPKKARPESRTNCNARIVIKLQEDGNYVVIEFIEEHNHELAPPSKVHMLRSQRKTQDAHARLIGNTHCAGIGSTNILSCTHAEGGGSQNFNVVQVDCNNDLQRKRNEILKKGDAQVLLDYFKHMQSKDPCFFYSIQMDEDNQMCSCFWCDAKSRIDYSFFGDVVCFDTIYKLNGNDISFASIIGVNNHGHSTLFGCALLLDETTESLVWLFETFLDAMYRKQPKTIFTDQAMPIAEAIKRVLPNTYHRLCLWHIYQNALKHLSFVFEAFTSFTIDFKSCIYGNETEEEFQSSWDTLLEKYNLVGNGWLQDLYQMREKWAQAYGREYFCAGVMTTQRSEDLNNYFMKYFKVTLSLQEFITQYEEAVTRRREKEKIEEFNFRKSKPNLLTEWTAEERAAAVYTRNIFSSFQKEYLGCMDLFLQSDGEDGTLYTYKVSSYRGYKPRTVTFDCSNSTVKCSCKKFEFTGILCAHALKILHSRELPDIPSQYYLKRWTKDATTGVVIDDFRKTVQVDCQPSLTLRYSELAHIALTLAVKGARTEKSGELVKRELTRLLEEIDYCLKIDSDQPIPHEDFISANYDNVGEVGIADHLSGGIKHPLEKARGTRGQSGQVSVGGIRKPPFILPMVPNIPMFPFNPARPMNMPHYTQGSIGLVEQSMLRPSTDSIQYGQMSGGWSAQPLWHGCFLPLNVVGCPSASSIQGLSFRAAGPSKIPLMPYVYTQGSVRHLDQATTQHGTKSSQVDIFYGYSSSRLNYISSIHMHLMLCRVNSRLHIDHQNHRRNSVQHIN* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00874 909 Pfam FAR1 DNA-binding domain 77 164 IPR004330 -
Eupl13g00874 909 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 54 678 IPR031052 GO:0006355
Eupl13g00874 909 SMART 26again6 577 604 IPR006564 GO:0008270
Eupl13g00874 909 ProSiteProfiles Zinc finger SWIM-type profile. 566 602 IPR007527 GO:0008270
Eupl13g00874 909 Pfam SWIM zinc finger 572 600 IPR007527 GO:0008270
Eupl13g00874 909 Pfam MULE transposase domain 286 380 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00874 Eupl-Chr13 13024521 13031861 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl13g00874 MULE 4.9e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00874 - K17604 psom:113357579 879.011