Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00866 ATGCACGTTCTGTCGTCAAAAAATTTCTACAACCAAGCAATAAAGACTAAGAGATTGATAAAAGAAAAAGAAAAAATCAAAATCAAACCCTCTCTCTCTCTCAGGAAACCCTTTTTCTGCTTTTCCAATTTACTTTTCCTACCATTTCATGAGATGGTTCTTCCGAAAAACTGGATCACCGCCATCTTTTTCGCCATTCTGGTTTTTCCAGCGACATCAACAGCCAAAAACCCATATACTTACTCGGTCCCGTACAAAACTTTCACTTCAAACCACAATGAGGACTTCAAATTTTCAGAATCCTCATCGACCGGTTTAGGAGCCCTTCAGATAACACCCGACACAATCCTCGAAGACCACAGCCTCTTAAATAAGTCTGGCCGTGTCATGTTCAAGACTCGTTTCAAGCTCTGGGAAGAAACAGATGACATCGTTGCCTCCTTCAACTCCACCTTTCTCATCAACCTCTACCCACCCAACGTATCCGCTGGTGCCGGCGAAGGTTTAGCTTTCGTTATAGCCCCAGATCTCATTATGCCGTCTGGTGCTGAAGGTAAATGGCTCGGCCTAACGAACCCCACCATCGACACTAACCCCTCCAACAAGCTCGTCGCTATTGAGTTCGACACCGTGAAACAAGATGATGACCCAGATGACAACCATATGGGGCTCGACATCAATAGCGTTCGATCAAACCAGACCGTCCCGCTCTCCAATTTTGGTATCAAAATCGTTAATCGGACGAACAGCGTCTGGGTTGAATACAACGGTAAATCTAGGCTTCTGAACGTTTACATGGCCGAAGAAGGGGAGCCCAAGCCCAACAACCCAGTTCTCACTGCGAACATAAGCCTGAAAGATCATGTGAATCAGTATTCGTACCTGGGATTCGCTGCTTCGACCGGGACTACGGGTCATCAGCTGAACTGCGTGCTGAGTTGGGATCTTTCGATTGAGATTCTCCCGGACAAGAAACATCGGACGTGGGTGAAGATTGTGGTAGGGGTGGGTGTTCCTGGACTGGCATTGTTGGTAATCTGTGTGGGTTATTATTTGCATAAGAGGAGGGTTGTCGACGACCCGAACATATTGGGGGCGTTGAAAAACTTACCAGGTATGCCAAGGGAGTTCAAGTATAAGGATCTGAAGAAGGCGACCAACAATTTCGATGAGAAGCTGAAGCTTGGACAAGGTGGATTCGGTGTTGTTTATAAAGGAGTATTACCCAAAGATAATCTCGAAGTGGCGGTGAAGAAGTTTTCCAGGGAGAACACACAGAGTAAAGATGACTTCTTGGCTGAGCTTACCATTATAAATCGTCTCCGCCACAAACATCTTGTCCGATTAGTCGGGTGGTGTTACAAGAATGGGATGCTTTTTTTGGTGTACGACTACATGCCAAATCGCAGCCTCGACAACCATTTATTTGATGGACCCGAGAAGATCCTAAGTTGGGACCGTCGATACAAGATCATATCGGGTGTAGCATCCGCGTTAAACTACCTCCACAATGAGTATGATCAAAAGGTGGTGCACCGAGACCTCAAAGCCAGCAATATCATGCTGGACTCCGACTACAATGCGCGCTTGGGGGACTTTGGCCTTGCACGTGCCTTGGATAATGAGAGAACCTCGTACGCTGAACTCCAAGTCCAAGGCGTTCCGGGCACCTTCGGCTACGTTGCACCGGAGTGTCACCTCACTTGGAAAGCCACGAGAGAGTCCGACGTGTACGGGTTCGGCGCAGTCGTGCTCGAGGTGGTGTGCGGTCAACGCCCTTGGACAAAGATCGCGGGGTTCCAGCAACTAGTTGACTGGGTATGGTGGTTGAATCGCGAAGGGCGCATTTTAGAGGCTGTCGATGACAGGCTTGGCAATGATTACGTGGTTGAAGAAGCAGTAAGGCTTCTGCATCTGGGGCTAGCATGTTCGCATCCTATAGCAAGTGAGAGGCCCAAAACTGGGACGATCTTTCAGATCATCTCCGGATCTTTGCCAGCACCTGACGTCCCTGCGATCAAGCCGTCTTTCGTGTGGCCTACGATGGAGCGCACAGAGGACAGCACCATGACCAACAGAGCAGATACGCTGCCCATGACATCTTCTAGTTACGGTGGGTCAGAGTGGCACGTGAGCTTGGAAAGCTACACGTGA 2154 0.487 MHVLSSKNFYNQAIKTKRLIKEKEKIKIKPSLSLRKPFFCFSNLLFLPFHEMVLPKNWITAIFFAILVFPATSTAKNPYTYSVPYKTFTSNHNEDFKFSESSSTGLGALQITPDTILEDHSLLNKSGRVMFKTRFKLWEETDDIVASFNSTFLINLYPPNVSAGAGEGLAFVIAPDLIMPSGAEGKWLGLTNPTIDTNPSNKLVAIEFDTVKQDDDPDDNHMGLDINSVRSNQTVPLSNFGIKIVNRTNSVWVEYNGKSRLLNVYMAEEGEPKPNNPVLTANISLKDHVNQYSYLGFAASTGTTGHQLNCVLSWDLSIEILPDKKHRTWVKIVVGVGVPGLALLVICVGYYLHKRRVVDDPNILGALKNLPGMPREFKYKDLKKATNNFDEKLKLGQGGFGVVYKGVLPKDNLEVAVKKFSRENTQSKDDFLAELTIINRLRHKHLVRLVGWCYKNGMLFLVYDYMPNRSLDNHLFDGPEKILSWDRRYKIISGVASALNYLHNEYDQKVVHRDLKASNIMLDSDYNARLGDFGLARALDNERTSYAELQVQGVPGTFGYVAPECHLTWKATRESDVYGFGAVVLEVVCGQRPWTKIAGFQQLVDWVWWLNREGRILEAVDDRLGNDYVVEEAVRLLHLGLACSHPIASERPKTGTIFQIISGSLPAPDVPAIKPSFVWPTMERTEDSTMTNRADTLPMTSSSYGGSEWHVSLESYT* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00866 717 SMART serkin_6 389 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00866 717 PANTHER - 110 665 - -
Eupl13g00866 717 Pfam Protein kinase domain 391 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00866 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Eupl13g00866 717 FunFam probable L-type lectin-domain containing receptor kinase S.5 374 465 - -
Eupl13g00866 717 CDD STKc_IRAK 395 661 - -
Eupl13g00866 717 Gene3D - 79 319 - -
Eupl13g00866 717 CDD lectin_legume_LecRK_Arcelin_ConA 85 318 IPR001220 GO:0030246
Eupl13g00866 717 Gene3D Phosphorylase Kinase; domain 1 374 465 - -
Eupl13g00866 717 FunFam probable L-type lectin-domain containing receptor kinase S.5 466 666 - -
Eupl13g00866 717 SUPERFAMILY Concanavalin A-like lectins/glucanases 88 326 IPR013320 -
Eupl13g00866 717 Gene3D Transferase(Phosphotransferase) domain 1 466 666 - -
Eupl13g00866 717 Pfam Legume lectin domain 85 325 IPR001220 GO:0030246
Eupl13g00866 717 ProSitePatterns Protein kinases ATP-binding region signature. 395 419 IPR017441 GO:0005524
Eupl13g00866 717 SUPERFAMILY Protein kinase-like (PK-like) 371 659 IPR011009 -
Eupl13g00866 717 ProSiteProfiles Protein kinase domain profile. 389 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00866 Eupl-Chr13 12937931 12943663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00866 107 670 Receptor kinase-like Gene Family AT2G37710 37.375 2.08e-119 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Eupl13g00866 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00866 - - psom:113283567 828.55