Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00858 ATGGCCATGGCTCGGCTCTCACCACATAATTCAGCTTCTTCTCTCTCTTATTCCTCGTCTTCTCTCTATGGCAGTTCTCTCTATGGGCTCCCTATAAAGTGCTTCAACCCAAACCCCCGAAATCGATATTTAAAGCTCACGAAGTCGTATTCAGGTTGCAGAGCTTCATGGCAAGAGCTCGCTGGAGTTCTGATCTTCTCTGCTATTCCTTTCACCGCCGTGAAAGCCATCGCCAACAGCTCTGTCGGAGCAACGCTTCAGAGGCGAATGCTGGAGACAAAGAAGGTTGCTGTAAAGAATTCTTCGAAGTTTGAGGCTTTGGCGGAGAAAGCAAGGAAAGAGAGTTTTTGGTATGGAGAAGAGCGTCCACGCTGGCTTGGTCCAATCCCGTATGACTATCCTACACATCTCACTGGAGAACTACCCGGTGATTATGGCTTTGATATTGCAGGTCTGAGCAAGGATCCCGTGGCTTTTCAGAAGTATTTCAACTTCGAAATATTGCATGCTCGTTGGGCTATGCTGGCAGCCCTTGGCGCTCTGATTCCAGAATTGTTGGACATATCAGGTGCCATTCACTTTATTGAACCTGTGTGGTGGCGAGTCGGCTATGCAAAGCTTAAGGGAGATACGCTTGACTACCTCGGCATCCCGGGACTCCATATAGCTGGAAGCCAAGGAGTTATTGTCATAGCTATTTGCCAAGCCCTTCTGATGGTGGGCCCAGAGTATGCAAGATATTGTGGGATAGAGGCTTTGGAGCCACTGGGAATTTATTTGCCTGGCGACATAAATTACCCTGGAGGTGTACTTTTTGATCCCTTGGGCCTTTCCAAAGACCCAGTTGCATTTGAGGAGCTGAAAGTGAAAGAGATTAAAAATGGGCGTTTAGCCATGGTTGCCTGGTTAGGTTTCTATGTCCAAGCAGCTCTAACCGGTAAAGGTCCTGTACAAAACCTTCTTGAACACATCTCAGATCCCCTCCACAACAATTTACTTTCCTTACTCAAATCCATGTAA 1020 0.4735 MAMARLSPHNSASSLSYSSSSLYGSSLYGLPIKCFNPNPRNRYLKLTKSYSGCRASWQELAGVLIFSAIPFTAVKAIANSSVGATLQRRMLETKKVAVKNSSKFEALAEKARKESFWYGEERPRWLGPIPYDYPTHLTGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLAALGALIPELLDISGAIHFIEPVWWRVGYAKLKGDTLDYLGIPGLHIAGSQGVIVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLGLSKDPVAFEELKVKEIKNGRLAMVAWLGFYVQAALTGKGPVQNLLEHISDPLHNNLLSLLKSM* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00858 339 FunFam Chlorophyll a-b binding protein, chloroplastic 124 336 - -
Eupl13g00858 339 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 95 336 IPR001344 GO:0009765|GO:0016020
Eupl13g00858 339 Gene3D Chlorophyll a/b binding protein domain 124 336 - -
Eupl13g00858 339 SUPERFAMILY Chlorophyll a-b binding protein 116 336 - -
Eupl13g00858 339 Pfam Chlorophyll A-B binding protein 134 309 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00858 Eupl-Chr13 12816602 12825440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00858 38 338 Chloroplast and Mitochondria Gene Families AT1G76570 79.402 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00858 K14172 - ming:122078266 574.318