Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00849 ATGTCGAGAGCATCGAAGAAGAAAGAACAAGGAAAGGATTTCTTCCTGGAGAATGGGGCTTGGTTATTAGAGGAGCTGATCGTTTCATGTGATGGAAAATGTAATCCCATACGGAACTTCTCTGTGCAGGAGATCATGAAAGCGACTAACAACTATGACCAAGACCGAATTCTGCGTAAGAGTGAAGATTTTACTTTGTACAGGGGAACACATGAGGACCATGACATTACTATAAAGAAGTTCAAAGGCAATTATACAAGATTTACTGAAAAGTGTATAAACGAAATTGGCATGCTATCTCAGATCAACCACAGGAACGTTTTGAAGATTATGGGCTACTGCATAGAGACTGAGATCCCCATACTGGTGTATGAATTTGCAGCCAATGGAGATCTCTTCGATCATATCTTTAAGAAGGAGGAGCGCAGATCTTCAGAAAGTCCTCCACTTCTATCATGGGAGAGAAGGTTAAGGATTGCAACTGAGACAGCCAGTGCAGTTTCTTATATCCACACAGCAACTTCCAAACCCATCATCCATAGAGACATAAAAGCTGGTAATATTATGCTAGACCAACGCTATGTCGCCAAACTATCCGATTTCTCATTCTCAATATCAATTCCCTTGGGTGATACACATGTGGAAGATGCAGTGCGAGGGACTATCGGGTTCATTGCTCCGGAGTACCTTGCTTCTGGTCGTTTTACAGAGAAGGCCGATGTTTATAGCTTCGGCATGCTTCTACTTGAGCTTTTAACAGGAAAGACGCCTTGGTCATTAGCCCATTTGGCTGAAGACCTCAATGTTCTGTTATTGGATTATGTCAGATCCTTTGTTGAAAATAATCGTCTTAGTGAGATTGTGGAATGTGCCATTTGGGAAGAGGCAGAGACTAAGCAGCAACTGCAAGCATTTGCTGAGCTTGCCATAAGATGTACAAATGAGATGGCGATGGAAAGACCGACCATGATGGAAGTGGCACAAAAGCTCAGATGGATTGATAGATCTGTCCAACCTTAA 1020 0.4245 MSRASKKKEQGKDFFLENGAWLLEELIVSCDGKCNPIRNFSVQEIMKATNNYDQDRILRKSEDFTLYRGTHEDHDITIKKFKGNYTRFTEKCINEIGMLSQINHRNVLKIMGYCIETEIPILVYEFAANGDLFDHIFKKEERRSSESPPLLSWERRLRIATETASAVSYIHTATSKPIIHRDIKAGNIMLDQRYVAKLSDFSFSISIPLGDTHVEDAVRGTIGFIAPEYLASGRFTEKADVYSFGMLLLELLTGKTPWSLAHLAEDLNVLLLDYVRSFVENNRLSEIVECAIWEEAETKQQLQAFAELAIRCTNEMAMERPTMMEVAQKLRWIDRSVQP* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00849 339 Gene3D Transferase(Phosphotransferase) domain 1 127 336 - -
Eupl13g00849 339 Gene3D Phosphorylase Kinase; domain 1 29 126 - -
Eupl13g00849 339 SUPERFAMILY Protein kinase-like (PK-like) 36 331 IPR011009 -
Eupl13g00849 339 Pfam Protein tyrosine and serine/threonine kinase 69 330 IPR001245 GO:0004672|GO:0006468
Eupl13g00849 339 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 6 333 IPR045274 GO:0007166
Eupl13g00849 339 ProSiteProfiles Protein kinase domain profile. 52 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00849 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Eupl13g00849 339 SMART serkin_6 64 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00849 Eupl-Chr13 12700422 12703198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00849 2 326 Receptor kinase-like Gene Family AT1G16260 45.706 4.18e-82 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl13g00849 PK_Tyr_Ser-Thr 8.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00849 - - tss:122661809 370.548