Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00846 ATGGAAGCAGGGTTTAGAGAAAATCAGAAATCCGCCATGGATGCATTTGAGAAGCTCGAAAAGGTCGGAGAGGGAACGTACGGGAAGGTTTACAGAGCAAGAGAGAGAGCAACGGGAAAGATCGTAGCCCTCAAGAAGACCCGTCTCCACGAGGACGATGAAGGAGTCCCTCCGACTACCCTCCGAGAGGTCTCACTGCTGAGAATGCTCTCCATGGATCCCCATGTTGTAAGACTGTTGGATGTCAAACAAGGCCAGAACAAAGAGGGAAAGACAATTCTCTACCTGGTTTTTGAGTACATGGACACTGATCTTAAGAAGTACATCCGAAGCTTCCGCCAAAACGGAGGCACCGTTCCTCCTAAAACCGTCAAGTGTCTGATGTACCAACTCTGCAAGGGTGTTGCTTTCTGCCATGGTCATGGAGTGCTGCACAGGGATCTGAAGCCTCACAATCTTCTGATGGATCGAAAGACAATGATGCTTAAAATAGCAGACCTTGGTCTGGCTCGTGCATTTACTGTTCCAATCAAGAAGTATACTCATGAGATATTAACTCTGTGGTATAGAGCTCCTGAAGTTCTTCTGGGTGCCACCCATTACTCAACCCCAGTAGATATGTGGTCTGTTGGCTGTATATTTGCCGAACTGGTTACAACTCAAGCACTCTTTCCTGGAGACTCTGAACTGCAACAGCTCCTCCATATTTTCAGGTTACTGGGTACTCCAAATGAAAAAGTGTGGCCAGGGGTAAGCAAATTAATGAACTGGCATGAGTATCCTCAGTGGAGTGCACAGAATTTGTCATCAGTTGTTCCTAATCTCGATGCCGATGGACTAGATTTGCTCTTAAAGATGTTGCAGTACGAACCATCGAAAAGGATCTCTGCAAAGAAAGCTATGGAGCACCCCTACTTTGATGATCTGGATAAAGCTCCTCTGTAA 945 0.4646 MEAGFRENQKSAMDAFEKLEKVGEGTYGKVYRARERATGKIVALKKTRLHEDDEGVPPTTLREVSLLRMLSMDPHVVRLLDVKQGQNKEGKTILYLVFEYMDTDLKKYIRSFRQNGGTVPPKTVKCLMYQLCKGVAFCHGHGVLHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSTPVDMWSVGCIFAELVTTQALFPGDSELQQLLHIFRLLGTPNEKVWPGVSKLMNWHEYPQWSAQNLSSVVPNLDADGLDLLLKMLQYEPSKRISAKKAMEHPYFDDLDKAPL* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00846 314 SMART serkin_6 16 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00846 314 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Eupl13g00846 314 Gene3D Transferase(Phosphotransferase) domain 1 103 313 - -
Eupl13g00846 314 SUPERFAMILY Protein kinase-like (PK-like) 11 309 IPR011009 -
Eupl13g00846 314 Pfam Protein kinase domain 16 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00846 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Eupl13g00846 314 PANTHER CELL DIVISION PROTEIN KINASE 14 307 - -
Eupl13g00846 314 Gene3D Phosphorylase Kinase; domain 1 4 102 - -
Eupl13g00846 314 FunFam Cyclin-dependent kinase 2 104 313 - -
Eupl13g00846 314 FunFam Cyclin-dependent kinase B2,2 12 102 - -
Eupl13g00846 314 ProSiteProfiles Protein kinase domain profile. 16 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00846 Eupl-Chr13 12657176 12660416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00846 11 314 Core Cell Cycle Gene Families AT1G20930 84.918 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Eupl13g00846 Pkinase 2.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00846 K07760 - nnu:104603831 605.905