Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00841 ATGGCGGGATTCGAACCAGGAGCAGGTTCTCGCTACGTCCACCAGCTCCTCAGACCAGAACTGCACTTACAAAGATCATCGCAGCAGCAGCAGCAACAACATCAAACTTCCGAAACCTCAGATTCCAAAGACTCACCTGAGAAAGATCAGAAACCTGACCCCGACGCAGCAACGACGAGCTCCGGTGCAGCAGCAGCTAACAACACCCGTAGACCCCGTGGCCGACCCGCAGGCTCAAAGAACAAGCCGAAGCCGCCGATAATCGTGACCCGCGACAGCCCGAATGCTCTCCGATCACATGTGCTCGAAGTCTCTTCTGGTGCCGACATCGTCGAGTGTGTGTCAAATTACGCAAGACGCCGAGGGAGGGGTGTTAGTGTTCTTAGCGGCGGCGGAACAGTCGTTAATGTCATGTTGCGTCAACCAGCGACACCACCAGGTAGCGTTGTTACACTGCACGGGAGGTTCGAGATACTGTCTTTGACCGGCACGGTACTTCCACCACCGGCACCACCAGGCGCCGGTGGGCTGACAATATTTTTGGCCGGTGGTCAAGGACAGGTCGTAGGGGGTAGTGTTGTGGGGCCCTTGGTGGCATCAGGTCCAGTAGTGTTGATGGCAGCATCGTTTGCTAATGCGGTGTTTGAACGGTTACCATTGGAAGAGGAGGAGTTACCGGTGCAGGTTCATCCTGCAGCATCACAATCCTCAGGTGTTACAGGCGGTGGTGGGCAATTGGGTGAGGGTGGTGGTGGTGGAAGTGGCGGAGCTGGTGCAGGTGCTAGTGGTGGACCTGGTGGAGTTTCTTTTTATAATTTGGGAGTGAACATGGGAAATTATCAGTTTCCAAGTGATGCTTTAGGCTGGGGTGGTAATGCTACCAGGCCTCCCTTTTGA 897 0.5507 MAGFEPGAGSRYVHQLLRPELHLQRSSQQQQQQHQTSETSDSKDSPEKDQKPDPDAATTSSGAAAANNTRRPRGRPAGSKNKPKPPIIVTRDSPNALRSHVLEVSSGADIVECVSNYARRRGRGVSVLSGGGTVVNVMLRQPATPPGSVVTLHGRFEILSLTGTVLPPPAPPGAGGLTIFLAGGQGQVVGGSVVGPLVASGPVVLMAASFANAVFERLPLEEEELPVQVHPAASQSSGVTGGGGQLGEGGGGGSGGAGAGASGGPGGVSFYNLGVNMGNYQFPSDALGWGGNATRPPF* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00841 298 PIRSF ESCAROLA 14 298 IPR014476 GO:0003680
Eupl13g00841 298 SUPERFAMILY AF0104/ALDC/Ptd012-like 94 229 - -
Eupl13g00841 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 248 IPR014476 GO:0003680
Eupl13g00841 298 ProSiteProfiles PPC domain profile profile. 94 231 IPR005175 -
Eupl13g00841 298 CDD DUF296 98 166 IPR005175 -
Eupl13g00841 298 FunFam AT-hook motif nuclear-localized protein 97 226 - -
Eupl13g00841 298 MobiDBLite consensus disorder prediction 21 39 - -
Eupl13g00841 298 MobiDBLite consensus disorder prediction 229 261 - -
Eupl13g00841 298 Pfam Plants and Prokaryotes Conserved (PCC) domain 98 211 IPR005175 -
Eupl13g00841 298 Gene3D - 97 235 - -
Eupl13g00841 298 MobiDBLite consensus disorder prediction 40 54 - -
Eupl13g00841 298 MobiDBLite consensus disorder prediction 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00841 Eupl-Chr13 12578279 12579989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00841 5 222 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 63.717 7.18e-79 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00841 - - nnu:104606865 347.436