Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00825 ATGGAAGAAGTAGTATGTGAATTGCATGGAGAAGACAGAAACGAGCAAGGATTGCCTCCTGGGTTTAGGTTTCACCCAACTGATGAAGAGCTTATAACCTTTTATTTAGCTTCAAAAGTCTTTAATGGAAGCTTTTCTGGTGTCCAGATTCCAGACCTTGATCTTAATAGATGTGAACCTTGGGAGCTTCCAGATATAGCAAAGATGGGGGAGAGAGAGTGGTATTTCTTTAGCCCGAGAGACAGAAAGTACCCAACTGGGTTGAGAACAAACAGAGCAACGGAAGCTGGATATTGGAAAGCCACAGGCAAAGATAGAGAGGTTCACAGTGCTTCAAACAAAACCCTACTGGGTATGAAGAAAACCCTAGTTTTCTACAAGGGAAGAGCTCCCAGAGGTGAGAAGACCAGGTGGGTCATGCACGAGTATCGTCTCGACGGCGACTTCTCCTCTCGCCACACCTGTAAGGAGGAATGGGTTATTTGCAGAATTATTCACAAGACGGGAGGAGAGAAGAGAACCCCATTTTTCCAAGCCAACAGCTACCTTCCAGAAGCTTCTTCCTCCACCTCCACTTCATTGCATCATCCACTGCTTGAATCCCCAACACTATTAGGAGGATCTCAATCTCCTATACAAACCCTCCAAAACCCTTATCTCATTCACCAAGAAAGCAGCTTAATAAGCCCTAGTGTTTCTCAACCCCACCTTTTTCCCACAAGTTTCCAACCAATTACCTTTTCAACAACCTCCATAGACACAGGCCCATCAGGCCCATCACCATCCATCCTCTTCAAAACCCTCCTCTCACATCAAGGGTGCAGTTCGAAGGGACCCACTCATGATCCTAAACAGTGCAGGACAGATACCAACTTTTCCCATTTTCAACCACTTGATGCAAACTTGCAGTGGGTTGATAAAAATCATCAAAATCCATGCCAAAACCCATTGTCATTTGACATGGGTTGTACGGTTTTAGGGTTTTCAGCTGTTGCAGATACTGTTCATGAGATGTCCACCTCAATGGCTTTCGACAGGGCCGGCTTTCAGATGATGTTAGATCGTCCCGTCAGAGAATCTGGACCTTTGGATGCTTGA 1098 0.4545 MEEVVCELHGEDRNEQGLPPGFRFHPTDEELITFYLASKVFNGSFSGVQIPDLDLNRCEPWELPDIAKMGEREWYFFSPRDRKYPTGLRTNRATEAGYWKATGKDREVHSASNKTLLGMKKTLVFYKGRAPRGEKTRWVMHEYRLDGDFSSRHTCKEEWVICRIIHKTGGEKRTPFFQANSYLPEASSSTSTSLHHPLLESPTLLGGSQSPIQTLQNPYLIHQESSLISPSVSQPHLFPTSFQPITFSTTSIDTGPSGPSPSILFKTLLSHQGCSSKGPTHDPKQCRTDTNFSHFQPLDANLQWVDKNHQNPCQNPLSFDMGCTVLGFSAVADTVHEMSTSMAFDRAGFQMMLDRPVRESGPLDA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00825 365 SUPERFAMILY NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Eupl13g00825 365 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Eupl13g00825 365 ProSiteProfiles NAC domain profile. 18 167 IPR003441 GO:0003677|GO:0006355
Eupl13g00825 365 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 249 - -
Eupl13g00825 365 FunFam NAC domain-containing protein 100-like 27 171 - -
Eupl13g00825 365 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00825 Eupl-Chr13 12207583 12210202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00825 1 241 NAC Transcription Factor Family AT1G76420 58.333 7.63e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl13g00825 NAM 1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00825 - - nnu:104606836 519.235