Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00823 ATGGGCAACACATGCCGTGGATCTTTCGGAAGCAAATACTTTCAGGGCTACACCGAGCCCGTAGATCGCTTGGTATCTGGGCGGAACGCTTCTGAGCATTCGAATTCCGATTACTCTCCGAGCAGCTTGAAATCTCAGCAGCTGATCGCTGAGGAATTCGCCAAGGAAAACCCCAAAAAGGATCCTAATTTATCTCTCGTCAGCCCCACCGGAAAAGAGAACATCAACATGAGACGAGGGATTGATAACCAGGCTTATTATGTATTGGGCCATAAGACTGTTAATATTCGTGATCTTTACATGTTGGGTCGTAAATTAGGGCAAGGGCAGTTCGGTACGACTTATTTGTGCACTGAGATCTCCACTGGGAATGAATACGCTTGCAAATCAATCTCAAAGAGGAAATTGATTTCTAAGGAAGATGTGGAGGATGTTAGGAGGGAGATTCAGATAATGCACCATTTGTCGGGTCACAAGAACATTGTGATGATCAAGGGTGCATTTGAAGATCCGTTGTATGTTCATATTGTGATGGAGCTGTGTGCTGGGGGTGAATTGTTTGATCGGATCATTCAGAGGGGGCATTATAGTGAGAGGAAGGCGGCTGAGCTGACGAAGATTATTGTGGGGGTCGTCGAGGCCTGTCATTCGCTCGGGGTTATGCATAGGGACTTAAAGCCTGAAAATTTTTTGCTGGTTAACAAGGATGACGATTTCTCTCTCAAAGCTATTGATTTCGGGCTCTCAGTTTTCTTCAAACCAGGTCAGGTTTTCACTGATGTAGTTGGAAGCCCATATTATGTTGCTCCTGAGGTACTTTGCAAGCATTACGGGCCAGAAGCAGATGTATGGACAGCAGGGGTAATACTGTATATATTGCTTAGTGGTGTACCGCCTTTTTGGGCAGAAACGCAGCAGGGGATATTTGATGCGGTATTGAAGGGAGTAATTGACTTTGAGTCGGACCCATGGCCTCTAATCTCTGACAGTGCCAAGGATCTTATCCGGAAGATGCTTTGTTCTCGACCTTCGGATCGCTTGACTGCTCATGAAGTATTATGTCATCCGTGGATATGTGAAAATGGGGTAGCTCCTGATCGTTCGTTGGATCCGGCTGTCCTTTCTCGCCTTCAACAGTTCTCCGCGATGAATAAGCTGAAGAAGATGGCTTTACGGGTAATAGCTGAAAGCTTATCAGAGGAAGAGATCGCTGGATTAAAAGAAATGTTTAAGGCGATGGATACTGACAACAGTGGTGCAATCACATTTGATGAACTAAAAGCTGGTTTGAGAAGATATGGCTCTAACTTGAAGGAGTCAGAGATCCGTGATCTCATGGATGCAGCTGATGTGGACAACAGTGGGACCATCGACTATGGGGAATTTATTGCTGCAACAGTTCATCTTAACAAGCTGGAACGTGAGGAACATCTCATTGCGGCATTTTCATACTTTGACAAGGATGGAAGTGGTTATATTACAGTTGATGAACTCCAGCAAGCTTGCTCAGAGCATAACATGACCGATGTTCTTCTTGAAGATATTATCAAAGAAGTTGATCAAGATAATGTAAGTAATGAATGTTTTGTGCTTCCAAAATGCCTCTTTCAGGAAATTATTATGCTCTTTAATTTTCAAAAGCACCTGATCTCTTCTGAAATACGGGTTAAAAGTACAATAGAAACCCCAGCGAGGAGTACAAAATCCCAATTGATCTGCATCTAG 1725 0.4394 MGNTCRGSFGSKYFQGYTEPVDRLVSGRNASEHSNSDYSPSSLKSQQLIAEEFAKENPKKDPNLSLVSPTGKENINMRRGIDNQAYYVLGHKTVNIRDLYMLGRKLGQGQFGTTYLCTEISTGNEYACKSISKRKLISKEDVEDVRREIQIMHHLSGHKNIVMIKGAFEDPLYVHIVMELCAGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLCKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGVIDFESDPWPLISDSAKDLIRKMLCSRPSDRLTAHEVLCHPWICENGVAPDRSLDPAVLSRLQQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSNLKESEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLIAAFSYFDKDGSGYITVDELQQACSEHNMTDVLLEDIIKEVDQDNVSNECFVLPKCLFQEIIMLFNFQKHLISSEIRVKSTIETPARSTKSQLICI* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00823 574 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Eupl13g00823 574 FunFam Calcium-dependent protein kinase 1 366 529 - -
Eupl13g00823 574 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Eupl13g00823 574 Gene3D Transferase(Phosphotransferase) domain 1 186 367 - -
Eupl13g00823 574 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Eupl13g00823 574 SUPERFAMILY EF-hand 382 523 IPR011992 -
Eupl13g00823 574 Gene3D Phosphorylase Kinase; domain 1 102 185 - -
Eupl13g00823 574 ProSiteProfiles EF-hand calcium-binding domain profile. 437 472 IPR002048 GO:0005509
Eupl13g00823 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Eupl13g00823 574 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Eupl13g00823 574 FunFam Calcium-dependent protein kinase 1 102 185 - -
Eupl13g00823 574 Pfam Protein kinase domain 100 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00823 574 PANTHER SERINE/THREONINE-PROTEIN KINASE 89 524 - -
Eupl13g00823 574 FunFam Calcium-dependent protein kinase 5 186 366 - -
Eupl13g00823 574 CDD EFh 406 465 IPR002048 GO:0005509
Eupl13g00823 574 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Eupl13g00823 574 SMART efh_1 441 469 IPR002048 GO:0005509
Eupl13g00823 574 SMART efh_1 477 505 IPR002048 GO:0005509
Eupl13g00823 574 SMART efh_1 405 433 IPR002048 GO:0005509
Eupl13g00823 574 CDD EFh 477 523 IPR002048 GO:0005509
Eupl13g00823 574 SUPERFAMILY Protein kinase-like (PK-like) 81 382 IPR011009 -
Eupl13g00823 574 Gene3D - 368 529 - -
Eupl13g00823 574 Pfam EF-hand domain 478 503 IPR002048 GO:0005509
Eupl13g00823 574 ProSitePatterns EF-hand calcium-binding domain. 486 498 IPR018247 -
Eupl13g00823 574 SMART serkin_6 100 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00823 574 ProSiteProfiles Protein kinase domain profile. 100 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00823 574 Pfam EF-hand domain pair 406 466 IPR002048 GO:0005509
Eupl13g00823 574 CDD STKc_CAMK 100 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00823 Eupl-Chr13 12181859 12191758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00823 1 523 EF-hand Containing Proteins AT2G17290 81.489 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl13g00823 Pkinase 5.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00823 K13412 - nnu:104603807 964.14