Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00822 ATGGCAACCCGACTTCGGTTTGAGAACTCCTGCGAAGTTGGGGTATTCTCAAAGTTGACCAATGCATACTGTTTGGTCGCAATTGGAGGATCGGAAAACCTCTACAGCACGTTTGAAGCTGAGCTAGCAGATGTTATCCCTGTGGTTAAAACCTCTATAGCAGGCACTAGAATAATTGGGCGGTTATGTTCTGGAAACAAGAAGGGACTTCTCTTGCCACACACTACTACCGACCAAGAGCTTCAACACTTGAGAAACAGTTTACCAGATCAGGTTGTTGTTAAACGCATTGAAGAGAGACTATCTGCTTTGGGTAATTGCATTGCTTGCAATGATCATGTTGCTCTCACACATACTGATCTTGACAAGGAAACTGAGGAGATGATTGCTGATGTTCTTGGAGTAGAAGTGTTCAGGCAGACGATAGCCGGAAACATTCTTGTGGGCAGCTACTGTGCCTTCTCCAACAGAGGCGGACTTGTCCATCCCCATACATCCATTGAAGACTTGGATGAACTTTCAACGCTCCTTCAAGTTCCTCTGGTGGCTGGGACTGTGAACCGAGGCAGTGAAGTCATTGCCTCTGGTATGACAGTCAATGACTGGACGGCATTCTGTGGGTCGGACACTACCGCTACAGAGCTTTCTGTTATCGAAAGCGTCTTCAAGTTGAGGGAAGCCCAACCCAATTCGATTGTTGATGAGATGAGGAAATCATTAATCGACAGCAATGTTTGA 738 0.4621 MATRLRFENSCEVGVFSKLTNAYCLVAIGGSENLYSTFEAELADVIPVVKTSIAGTRIIGRLCSGNKKGLLLPHTTTDQELQHLRNSLPDQVVVKRIEERLSALGNCIACNDHVALTHTDLDKETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIASGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPNSIVDEMRKSLIDSNV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00822 245 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Eupl13g00822 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Eupl13g00822 245 FunFam Eukaryotic translation initiation factor 6 1 225 - -
Eupl13g00822 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Eupl13g00822 245 CDD IF6 2 223 IPR002769 GO:0042256|GO:0043022
Eupl13g00822 245 Gene3D - 1 225 - -
Eupl13g00822 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 243 IPR002769 GO:0042256|GO:0043022
Eupl13g00822 245 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Eupl13g00822 245 NCBIfam translation initiation factor IF-6 4 224 IPR002769 GO:0042256|GO:0043022
Eupl13g00822 245 SUPERFAMILY Pentein 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00822 Eupl-Chr13 12164746 12171054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00822 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 88.980 3.93e-168 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00822 K03264 - msin:131228626 463.766