Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00814 ATGTGGAAAAATGTGATTTTTGAGGATAAAGTTATACAAGATCTTAATAATCCCTACAATCAAAACACGGAACCGCCGCAACCCCTCACTGTCGACTCCGATTTCGTAGTCATCCTCGCCGCCCTATTATGTGCTCTAATTTGCGTCGTCGGACTCGTCGCCGTGGCTCGCTGCGCCTGGCTTCGCCGAACAACCGGAGGTGCCGTACGTTCGCTGCCTCAGGTTCCACCGAACAAAGGACTGAAAAAGAAGATCCTCCGATCACTCCCGAAATCCAACTTTAACAGCGGCGTTAACGGAAAGCTAGCTGATTGCCCTATCTGCTTAACCGAATTCGTCGACGGTGATGAAATCAGAGTCTTGCCTCAGTGTGGACATGGGTTCCATATCGGATGCATCGACACGTGGCTTGGGTCTCACTCGTCATGTCCGTCATGTCGTCAGATTCTGGTTGCCACCAGGTGTCAGAAGTGCGGCGGGTTCCCGGCGAGTTCCGGCTCCGCTGTTGAGATTGAGGCGGGTTTGAAAGCTCGAGAAGATGATATTAATAGGTTTTTACCTTAA 564 0.5089 MWKNVIFEDKVIQDLNNPYNQNTEPPQPLTVDSDFVVILAALLCALICVVGLVAVARCAWLRRTTGGAVRSLPQVPPNKGLKKKILRSLPKSNFNSGVNGKLADCPICLTEFVDGDEIRVLPQCGHGFHIGCIDTWLGSHSSCPSCRQILVATRCQKCGGFPASSGSAVEIEAGLKAREDDINRFLP* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00814 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 151 IPR013083 -
Eupl13g00814 187 CDD RING-H2_EL5-like 104 147 - -
Eupl13g00814 187 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Eupl13g00814 187 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 29 159 - -
Eupl13g00814 187 SMART ring_2 105 146 IPR001841 -
Eupl13g00814 187 Pfam Ring finger domain 104 147 IPR001841 -
Eupl13g00814 187 SUPERFAMILY RING/U-box 104 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00814 Eupl-Chr13 12076302 12077652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00814 10 180 C3H Transcription Factor Family AT1G76410 57.627 1.82e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00814 - - tss:122662793 256.529