Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00807 ATGAGAGAACTAGGCTCTTCATCATTTTCTGTCACCATGAATCTGGTTTGGCTTCTTCTACTATCAGTTGTCGATTTGCGAGTGTTCTCACATGGGGTTCCAAGACCTGCCATTGTGAACATTGGAGCTATTATGACATTTGGTTCCATCAATGGGAGAGTTTCAAAGATTGCCATGGAAGCTGCTGTGGAAGATGTGAATTCTGATCCTAGTGTTCTTGGTGGAAGCAAATTGGCTATCTCAATGCACGACTCCAACTACAGTGGATTTCTTGGCATAATCGGGGCTTTACAGTACATGGGGGCTGAGACCGTTGCCATAATTGGCCCTCAATCTTCAGTAATGGCTCGTGTACTCTCACAACTTGCAAATGAACTCCAAGTCCCGCTACTATCTTTCACAGCCACAGACCCCCATCTTTCCGCCCTTCAGTATCCCTTCTTTGTCCAGACTTCACCAAGTGATCTGTTCCAGATGACTGCAATTGCTGATATGGTCAGTTACTATGGTTGGAGAGAAGTAATTGCAGTCTTCACTGATGATGATGATGGGCAAAATGGTATAGCTGCATTAGGCGAAAAACTTGCAGAGCGACGTTGTAAAATTTCCTACAAAGCAGCACTCCCCCCTGAGCCTAGAGCAACTAGAGGAGACATTACAGATGTACTGGTTAAGGTGGCATTGATGGAGTCCCGGATAATTGTTTTACATACTCGTAGAAATTCAGGTCTCTTGGTCTTTGATGTGGCCCACCATCTTGGAATGATGGAAAGTGGGTTTGTGTGGATAGCTACTACTTGGCTCTCTACTGTTTTAGATTCGACATCTCCCCTCACTCCAATGACTGCAAATTCCATCCAAGGGGTTCTCACGCTGCGTCCACACACACCAGATTCGGAAAGGAAAAGAGCTTTCTTCTCTAGGTGGAGCCAGCTGAGTAGCGGTTCTATTGGGTTGAATCCCTATGGTCTATATGCATATGATTCTGTATGGATGATTGCTAATGCAATTAAAGCATTTTTCGATCAGGGAGAGACCATGTCATTTTCTAAGGATTCAAGGTTAAGTGCAGTGGGAGGGGGGCTGCACCTTGAAGCGATGGCAGTTTTTGATGGAGGGAAGCAGTTGTTGAACAATATATTGCAGACCAATATGTCGGGTCTAACTGGCCCTGTTCAGTTTAATTCAGACAGATCTCTCATCCTTCCCTCATACGACGTCATTAATGTGATTGGAAGTGGCTTTCGGCAGATTGGCTACTGGTCTAATTATTCCGGGCTATCTGTTGTGCCACCTGAGACACTCTATGTGAAACCTCCTAACCGTTCAAGTTCAAACCAACAACTACACAGCGTAATCTGGCCTGGGGAAACAACAACGAAACCTCGTGGATGGGTTTTTCCAAACAACGGAAGACAGTTGAGGATTGGGGTCCCTATTCGGGTTAGTTATCTGGAATTTGTCTCGCCAGTAAAAGGTACTGACATGTTCAGGGGATACTGCATAGATGTATTTCTTGCTGCCATAAACTTGCTACCCTATGCCATTCCATATCGGTTCATCCCCTATGGAGATGGTCATAAGAATCCGAGCTATTCCGAGCTTGTAAATATGGTCGCATCAAATGTCTTTGATGCTGCAGTAGGTGACATTGCAATTATCGCAAACCGAACCAAGGTTGTGGATTTTATGCACCCATATTCCGAGTCAGGGCTAGTTGTATTGGTCCCAGTGAGGAAGTTGAACTCGAGTGGTTATGCTTTCCTGCGGCCATTTACTCTACCGATGTGGGTTGTCACGGCAGCTTCTTTTCTTCTCGTGGGAGCAGTTGTGTGGATTCTGGAACATAGAGTGAATGATGAATTCCGGGGGCCACCTAGACAACAAGTTGTTACGATTCTATGTTGGGTTCTTCTCTTTTTTGCAGGAGAAAACACAATAAGCACCCTTGGTCGCTTTGTGCTGATCATATGGTTTTTTGTGGTTTTGATAATCAATTCAAGCTACACTGCAAGTCTGACCTCAATTCTCACAGTGCAACAACTCTCCTCACCCATCAATGGAATTGAAAGCTTGATAGCAAGCGGCAAGCCTATTGGATTCCCAGAAAGATCTTTTGCTGAAAACTACTTGAGCGACGATCTCAACATTCCTAAATCTAGACTTGTTGCTCTTGGCTCAGCAGAGGAGTATGCTATAGCCCTTGAAAGGGGGACTGTAGCTGCTGTGATTGATGAACGGCCATATGCAGAACTCTTCCTTTCACACTACTGCAAGTTTTCAATTGTAGGCGACCAAGTCACTCATATTGGGTGGGGATTTGCGTTTCCACATGACTCTCCCATAGCCGTTGACATGTCAACTGCAGTTCTAACACTGTCGGAGAATGGGGATCTCGAGAGGATCCACGACAAGTGGCTGAGGAGAAGTACTTGTAGTTTACAGATCACTGAGCTTGAATCAGACCGGCTTCCCCTTGACAGCTTCTGGTGCCTCTTTCTCATAATTGGGGTGGCATGTTTTTTGGCTGTCCTCTTATACTTCATCTTGTTAGTACGCCAATTCAATCAGCATTTCTCCAAAGAATGCAATCAGTCTGGTGGAGGTAGTTCATGGTCTGCATGCCTCCGTCGGTTCTTATCTTTTGTCGACGGCAAAGAAGAAGAAACAAAGAGCAAGTCCTCAACTACTAATGAGGAAGTCTAA 2706 0.4512 MRELGSSSFSVTMNLVWLLLLSVVDLRVFSHGVPRPAIVNIGAIMTFGSINGRVSKIAMEAAVEDVNSDPSVLGGSKLAISMHDSNYSGFLGIIGALQYMGAETVAIIGPQSSVMARVLSQLANELQVPLLSFTATDPHLSALQYPFFVQTSPSDLFQMTAIADMVSYYGWREVIAVFTDDDDGQNGIAALGEKLAERRCKISYKAALPPEPRATRGDITDVLVKVALMESRIIVLHTRRNSGLLVFDVAHHLGMMESGFVWIATTWLSTVLDSTSPLTPMTANSIQGVLTLRPHTPDSERKRAFFSRWSQLSSGSIGLNPYGLYAYDSVWMIANAIKAFFDQGETMSFSKDSRLSAVGGGLHLEAMAVFDGGKQLLNNILQTNMSGLTGPVQFNSDRSLILPSYDVINVIGSGFRQIGYWSNYSGLSVVPPETLYVKPPNRSSSNQQLHSVIWPGETTTKPRGWVFPNNGRQLRIGVPIRVSYLEFVSPVKGTDMFRGYCIDVFLAAINLLPYAIPYRFIPYGDGHKNPSYSELVNMVASNVFDAAVGDIAIIANRTKVVDFMHPYSESGLVVLVPVRKLNSSGYAFLRPFTLPMWVVTAASFLLVGAVVWILEHRVNDEFRGPPRQQVVTILCWVLLFFAGENTISTLGRFVLIIWFFVVLIINSSYTASLTSILTVQQLSSPINGIESLIASGKPIGFPERSFAENYLSDDLNIPKSRLVALGSAEEYAIALERGTVAAVIDERPYAELFLSHYCKFSIVGDQVTHIGWGFAFPHDSPIAVDMSTAVLTLSENGDLERIHDKWLRRSTCSLQITELESDRLPLDSFWCLFLIIGVACFLAVLLYFILLVRQFNQHFSKECNQSGGGSSWSACLRRFLSFVDGKEEETKSKSSTTNEEV* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00807 901 PIRSF IGluLR_plant 8 901 IPR017103 -
Eupl13g00807 901 Gene3D - 739 770 - -
Eupl13g00807 901 FunFam Glutamate receptor 469 585 - -
Eupl13g00807 901 Pfam Bacterial extracellular solute-binding proteins, family 3 531 807 IPR001638 -
Eupl13g00807 901 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 886 IPR015683 -
Eupl13g00807 901 FunFam Glutamate receptor 154 306 - -
Eupl13g00807 901 Pfam Ligand-gated ion channel 808 840 IPR001320 GO:0015276|GO:0016020
Eupl13g00807 901 FunFam Glutamate receptor 708 811 - -
Eupl13g00807 901 CDD GluR_Plant 472 807 - -
Eupl13g00807 901 SUPERFAMILY Periplasmic binding protein-like II 451 809 - -
Eupl13g00807 901 CDD PBP1_GABAb_receptor_plant 40 431 IPR044440 -
Eupl13g00807 901 Gene3D - 469 585 - -
Eupl13g00807 901 Pfam Receptor family ligand binding region 57 412 IPR001828 -
Eupl13g00807 901 Gene3D - 57 402 - -
Eupl13g00807 901 SMART GluR_14 475 809 IPR001320 GO:0015276|GO:0016020
Eupl13g00807 901 SUPERFAMILY Periplasmic binding protein-like I 35 466 IPR028082 -
Eupl13g00807 901 FunFam Glutamate receptor 585 712 - -
Eupl13g00807 901 Gene3D - 586 698 - -
Eupl13g00807 901 Gene3D - 771 806 - -
Eupl13g00807 901 Gene3D - 154 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00807 Eupl-Chr13 11971338 11975439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00807 35 894 Ion Channels AT1G42540 58.362 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00807 K05387 - nnu:104603791 1303.12