Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00806 ATGAAATTGGTGTGGCTTCTGTTACTGGTTTTCTATTTAGGGGTGTTTTCAAATGGAGTAAGTAAGAGTGTTCATACAAGACCTGCTGTTGTGAACATTGGAGCTATTTTCACTTTCGATTCTATGATTGGCAAAGTTGCGAAGATTGCCCTGGAGGCTGCAGTTGAAGATGTGAACTCCAGTCCTAGCCTTCTTGCTGGAACCAGACTAAACCTTAAAATGCAGGACGCCAATTATAGTGGATTTCTTGGCATTGTTAAGGCTTTACAGTTCATGGAGACCGAGATCGTGGCCATCATTGGCCCCCAGTCTTCCGTTCTGGCCCATGTAATCTCGCATGTCGCAAATGAACTCCAGGTCCCTTTATTATCATTTGCAGCTACAAGTCCTGCCCTTTCTTCACTTCAGTACCCCTTCTTCGTGAGGACAACACAGAATGATCTGTACCAGATGGCCGCAGTTGCGGAGATAATTCAGTACTATGGTTGGAGAGAGGTAATTGCAATCTTCATCGATGACGATTATGGTAGATATGGGGTAGCTGCATTAGGAGATGAACTTGCTAAGAGAAACTGTAAGATCTCTTATAAAGCTGCTATGAACCTTAATGTGAACCGGAATGACATTACAGATGTACTGGTTAAGTTGGCAATGATGGAGTCCCGGGTTCTTGTTCTACACACTTATAGCAATTCGGGTCTCGAGGTATTCGATGTCGCACATTATCTTGGAATGACGGGAAATGGATATGTGTGGATAGCTACCAATTGGCTCTCTACTATCTTAGATACTTCTTCGCCTCTCCCTTCTGCCTCCATGAATTTGATCCAAGGAGTTCTAACATTGCGTATGCACACAGCTGATTCAGAACCAAAAAGATCTTTTATCTCTAGGTGGAGCAACTTGACTAATAAAGAGAGGGCACATGGCCCTTTTGGGTTGAATACTTATGGTCTATATGCTTATGACACTGTATGGCTGCTAGCAAATGCGATCAATGCATTCTTCAATCAGGGAGGAACAATTTCGTTTTCTAATGATTCAAGGTTAAATGAAATGCGGGGAGGGAATTTAAACCTTGAAGTAATGAGCATCTTCAACGGAGGGAAGCTGTTGCTGGAGAATATTTTGCAGAGCAAGCTAACAGGTCTAACTGGCACAATGCAGTTTACTACAGACAAGTCCCTCATTCATCCTGCATTTGAAGTCATTAACGTGATTGGCACTGGGTCCCGAAGGATCGGGTACTGGTCCAACCATTCCGGGTTATCAGTTCTGCCCCCGGAGATGCTCTACACGAAGCCACCTCATCGTTCAAGTTTGAATCAACAACTATACAGTGCAATTTGGCCTGGGCAAACAACGACAAGGCCTCGTGGGTGGGTTTTCCCAAATAATGGTAGGCAATTGAGAATTGGAGTCCCTAATCGAGTTAGTTATCATGAATTTATCTCTCATGTAAAAGGTACTGATACAATCAAGGGGTACTGCATAGATGTATTTACTGCAGCCGTAAACTTGTTACCATATGGTGTTCCCTATAAATTGATTCCATATGGAGACGGTTATAAGAGCCCGAGTTACAATGAGCTGGTGAACTTGATCACAACGGATTTCTTTGATGCTGTAATAGGTGACATAACAATCGTGACAAACCGAACAAGGGTCGTGGATTTTACGCAGCCATATATTGAGTCTGGGTTAGTCGTAGTGGCCCCTGTTAAGAAGTTGAACTCGAATGCTTGGGCTTTCCTGCAGCCGTTTACTCCAATGATGTGGGGTGTCACGAGTATTTCTTTCCTTGTTGTCGGAGCAGCTGTGTGGATTCTGGAGCATAGAATGAACGATGAGTTCCGGGGCCCTCCCAAAAAACAAGCTGCAACCATTCTGTGGTTTAGCTTGTCAACTTTGTTCTTTTCCCATAGAGAGAACACAGTCAGCACACTAGGTCGCTTTGTGTTGTTCATCTGGCTTTTCGTGGTTCTGATAATCAACTCGAGCTATACCGCGAGCCTGACCTCATTCCTCACCGTGCAACGGCTATCTTCATCCATCGAAGGGATTGAAAGTTTGATAGTGAGCAATGATCCCATTGGCTTCCCAGACGGTTCCTTTGTTGAAAACTATCTGCATGAGGAACTCAACATCCCCAAGTCTAGACTCGTCCCTCTTGGATCACCAGAAGCATATGCTAAAGCCCTCCAAGATGGTCCCAATAAGGGGGGTGTTGCTGCTGTGGTTGATGAAGGTGCATATATGGAGCTCTTCCTCTCAAGCCGATGCAAGTTCACAACTGTAGGCCGGGAGTTCACCAATAACGGGTGGGGATTTGCCTTCCCACGGGACTCTCCCTTAGCTGTTGACTTGTCAACTGCCATTCTGACACTATCAGAGAATGGCGATCTCCAAAGGATCCATGACAAGTGGCTGTCTAGACATGCTTGCAGTTCTCATGGTGCAGAGCTCGAATCAGACCGGCTGCAACTCAGGAGCTTTTGGGGGCTCTATCTCATATGTGGACTAGCTTGCTTTCTTGCTCTCCTCATATACTTCATCCTGATGCTACGCCAGTTCAGCCGACACTACTCTGAAGATTCTAATTCTTCTGGTCGAGGTAACTCACGGTTAGCGCGCCTCCAAACATTCCTGTTGTTTGTTGATAAGAAGGAAGAGGAAGTAAAGAGAAGGTCCAAGAGAAGAAAATTGAAACAGTCCTCACATGACAATGAGAAGGAAGACAGATTGGTTAACACGTCCAAGAGAAAAAACAAGGAAACATCCTCTAACAACGATATTTATGTTGGTAGTAGCCTAATTAATTAG 2823 0.4467 MKLVWLLLLVFYLGVFSNGVSKSVHTRPAVVNIGAIFTFDSMIGKVAKIALEAAVEDVNSSPSLLAGTRLNLKMQDANYSGFLGIVKALQFMETEIVAIIGPQSSVLAHVISHVANELQVPLLSFAATSPALSSLQYPFFVRTTQNDLYQMAAVAEIIQYYGWREVIAIFIDDDYGRYGVAALGDELAKRNCKISYKAAMNLNVNRNDITDVLVKLAMMESRVLVLHTYSNSGLEVFDVAHYLGMTGNGYVWIATNWLSTILDTSSPLPSASMNLIQGVLTLRMHTADSEPKRSFISRWSNLTNKERAHGPFGLNTYGLYAYDTVWLLANAINAFFNQGGTISFSNDSRLNEMRGGNLNLEVMSIFNGGKLLLENILQSKLTGLTGTMQFTTDKSLIHPAFEVINVIGTGSRRIGYWSNHSGLSVLPPEMLYTKPPHRSSLNQQLYSAIWPGQTTTRPRGWVFPNNGRQLRIGVPNRVSYHEFISHVKGTDTIKGYCIDVFTAAVNLLPYGVPYKLIPYGDGYKSPSYNELVNLITTDFFDAVIGDITIVTNRTRVVDFTQPYIESGLVVVAPVKKLNSNAWAFLQPFTPMMWGVTSISFLVVGAAVWILEHRMNDEFRGPPKKQAATILWFSLSTLFFSHRENTVSTLGRFVLFIWLFVVLIINSSYTASLTSFLTVQRLSSSIEGIESLIVSNDPIGFPDGSFVENYLHEELNIPKSRLVPLGSPEAYAKALQDGPNKGGVAAVVDEGAYMELFLSSRCKFTTVGREFTNNGWGFAFPRDSPLAVDLSTAILTLSENGDLQRIHDKWLSRHACSSHGAELESDRLQLRSFWGLYLICGLACFLALLIYFILMLRQFSRHYSEDSNSSGRGNSRLARLQTFLLFVDKKEEEVKRRSKRRKLKQSSHDNEKEDRLVNTSKRKNKETSSNNDIYVGSSLIN* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00806 940 SMART GluR_14 471 812 IPR001320 GO:0015276|GO:0016020
Eupl13g00806 940 FunFam Glutamate receptor 146 303 - -
Eupl13g00806 940 MobiDBLite consensus disorder prediction 903 927 - -
Eupl13g00806 940 FunFam Glutamate receptor 465 581 - -
Eupl13g00806 940 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 900 IPR015683 -
Eupl13g00806 940 Gene3D - 49 398 - -
Eupl13g00806 940 Gene3D - 146 423 - -
Eupl13g00806 940 Pfam Receptor family ligand binding region 49 408 IPR001828 -
Eupl13g00806 940 CDD PBP1_GABAb_receptor_plant 32 425 IPR044440 -
Eupl13g00806 940 Gene3D - 773 809 - -
Eupl13g00806 940 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 104 132 - -
Eupl13g00806 940 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 44 60 - -
Eupl13g00806 940 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 321 333 - -
Eupl13g00806 940 CDD GluR_Plant 468 810 - -
Eupl13g00806 940 Gene3D - 581 696 - -
Eupl13g00806 940 SUPERFAMILY Periplasmic binding protein-like I 27 462 IPR028082 -
Eupl13g00806 940 SUPERFAMILY Periplasmic binding protein-like II 445 811 - -
Eupl13g00806 940 Pfam Bacterial extracellular solute-binding proteins, family 3 490 811 IPR001638 -
Eupl13g00806 940 MobiDBLite consensus disorder prediction 896 940 - -
Eupl13g00806 940 Gene3D - 465 580 - -
Eupl13g00806 940 FunFam Glutamate receptor 581 711 - -
Eupl13g00806 940 PIRSF IGluLR_plant 1 937 IPR017103 -
Eupl13g00806 940 Gene3D - 745 772 - -
Eupl13g00806 940 Pfam Ligand-gated ion channel 812 843 IPR001320 GO:0015276|GO:0016020
Eupl13g00806 940 FunFam Glutamate receptor 707 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00806 Eupl-Chr13 11957334 11968638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00806 1 930 Ion Channels AT1G42540 60.468 0.0 1185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00806 K05387 - ming:122083277 1345.49