LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl13g00796	ATGTCGTGTTCGTCGTCGTCAGGGTCTGAGGAGGAAGACGAGGGGACCGATTCTTATAGGAAAGGAGGATACCACGCGGTCAGAGTTGGCGATCCGTTCGCTGGTGGCCGATATATCGCGCAGAGGAAGCTTGGTTGGGGCCATTTCTCCACCGTTTGGCTCGCCTACGATACCCGTTGCTCTAGATATGTTGCTCTTAAAATCCAGAGGAGTGCTGCTGATTTCGCTGAAGCTGCCCTCCATGAGATCAAAGTCCTCTCTGCCATAGCCGATGGTGACCCCTCAAATTCCAAGTGTGTCGTTCGATTAGTCGATCACTTTAAGCACGCAGGCCCAAACGGGCAACATCTGTGCATGGTCTTAGAATTCCTCGGTGACAGCTTGCTGCGGTTAATCAGACATAACCGTTATAGAGGCCTAACATTGAACAAAGTTAGGGAGATCTGCAGATGGGTTTTGCTGGGTCTCGATTACTTGCATAGAGAACTTGGTATAATTCATGCGGACCTAAAACCTGAAAACATTCTTCTTGTCTCTACCATTAATCCTGCCAAGGACCCTGTTCAGTTTGGGTTCTCTCCAATCCTCGAGAGGCCCGAAGGCAATCCGAATGGTGGGGTTGTAGTGAATATTGATGAGAAGAATCTGAAGAGGAAGGCAAAAAGAGCGGTGGCTAAGATCTCAAGTAGGAGAGCTTCAATGGGGGGGATTCCAAAGCGTGAGAGGTCCTTGGATGGGATTGATCTAAGGTGCAAGGTTGTGGATTTTGGAAATGCATTTTGGGTTGATAAGCCGTTCGCAGAAGATATTCAGACAAGGCAGTATAGAGCTCCTGAGGTTATCCTTGGGACCAGGTACTCCTTCTCTGTTGACATGTGGTCTTTTGCTTGCATTGCCTTCGAGCTTGCTACTGGTGACATGATGTTTGCTCCTAAGAGTGGCCAAGGGTTTAGCGAGGATGAGGATCACCTTGCTCTAATGATGGAATACTTAGGAAAGATGCCTCGAAAGATTGCCATTGGGGGATCTCGATCAAAAGAATTCTTCGATAGACACGGAGATCTGAAGAGGATCCGAAGGCTGAAATTCTGGCCACTAGATCGACTTCTGGTCGAGAGCTACAAATTTAACGACTCTGATGCTCGTGAGTTTGCCGAGTTTCTGTGCCCCCTTCTCGATTTTGCACCAGAGAAGCGGCCATCAGCAGAACAGTGCTTGCAACATCCGTGGCTCAAGATTAGAAATCCGACACCAAGTGAGGAGAAGAAAGAGTCAAGCAAGGAAAAGTTGGATGTTGGGATGAAAAAACTTCAGATTAAAGTGGGTAGATGA	1332	0.4797	MSCSSSSGSEEEDEGTDSYRKGGYHAVRVGDPFAGGRYIAQRKLGWGHFSTVWLAYDTRCSRYVALKIQRSAADFAEAALHEIKVLSAIADGDPSNSKCVVRLVDHFKHAGPNGQHLCMVLEFLGDSLLRLIRHNRYRGLTLNKVREICRWVLLGLDYLHRELGIIHADLKPENILLVSTINPAKDPVQFGFSPILERPEGNPNGGVVVNIDEKNLKRKAKRAVAKISSRRASMGGIPKRERSLDGIDLRCKVVDFGNAFWVDKPFAEDIQTRQYRAPEVILGTRYSFSVDMWSFACIAFELATGDMMFAPKSGQGFSEDEDHLALMMEYLGKMPRKIAIGGSRSKEFFDRHGDLKRIRRLKFWPLDRLLVESYKFNDSDAREFAEFLCPLLDFAPEKRPSAEQCLQHPWLKIRNPTPSEEKKESSKEKLDVGMKKLQIKVGR*	444

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl13g00796	443	PANTHER	PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED	232	425	-	-
	Eupl13g00796	443	Gene3D	Phosphorylase Kinase; domain 1	24	123	-	-
	Eupl13g00796	443	Gene3D	Transferase(Phosphotransferase) domain 1	92	411	-	-
	Eupl13g00796	443	MobiDBLite	consensus disorder prediction	409	432	-	-
	Eupl13g00796	443	MobiDBLite	consensus disorder prediction	1	23	-	-
	Eupl13g00796	443	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	165	177	IPR008271	GO:0004672\|GO:0006468
	Eupl13g00796	443	CDD	STKc_SRPK	27	411	-	-
	Eupl13g00796	443	ProSitePatterns	Protein kinases ATP-binding region signature.	44	67	IPR017441	GO:0005524
	Eupl13g00796	443	ProSiteProfiles	Protein kinase domain profile.	38	411	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl13g00796	443	FunFam	Protein kinase superfamily protein	24	123	-	-
	Eupl13g00796	443	FunFam	Serine/threonine-protein kinase SRPK	117	411	-	-
	Eupl13g00796	443	MobiDBLite	consensus disorder prediction	415	432	-	-
	Eupl13g00796	443	Pfam	Protein kinase domain	39	180	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl13g00796	443	Pfam	Protein kinase domain	251	411	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl13g00796	443	SUPERFAMILY	Protein kinase-like (PK-like)	32	413	IPR011009	-
	Eupl13g00796	443	SMART	serkin_6	38	411	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl13g00796	Eupl-Chr13	11803258	11815324	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl13g00796	4	428	EF-hand Containing Proteins	AT5G22840	51.782	9.84e-176	501

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_SRPK	Eupl13g00796		Pkinase	3.4e-21	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl13g00796	K08832		-	nnu:104603780	733.021