Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00789 ATGGGAGGCTTATTACACCTTTTTGACTTCAACCAGGGCAGCACGTCCCGGAAGTTACTGACACATAAGAAACACGTTGATGGCCTTGAAGCTCCTAGAAATAGCTTGGAGCTGCCAATAGAAACTTCGCAGTGCTATGATGCCATGGGCGACAACGTACCGTATTCATATCAAGTGAAGCAGAACTCATCCAAAGATAACTGCTATCCAAATGGGACTTCAATGAAGAAGTTGATTGATGAGGAGATATCAAAAGAACCAGAAAGTAGACGTAATGTACCTAGTGTTGTGGCCCGTTTGATGGGGATGGATATGTTACCTTCAGACACAAAACCAGCAATCCTTGTAAAGGAGAGAAAGGAAAACACGGGGAACAATTTCCCAAGAAAGGAACAAATTCAAAATGGTTCAATTCGCCGAAGTCCTCTTGGCTTAAAACCTTCCAAGCAAACAGAATATGATTTACTTCCCCACAGTAAAGAAAGAGATCCTGACCAATCAAGCAACAACCTGAAGTTTGGGAAACCGCGGCCTCGAGAACATCCTCAAGAGGAGCAGCTACAGAAATTCAAGAAAGAATTTGAAGCATGGCAAGCAGCCAGGGTTTGGGAAAGTTCAAGGGTTGTTGAACTTGGTAGCATTCCTAGACAATGGCTTGCTCAAGAACACCTCAACAAAGAGAAGATGGCTCTCTACGCAGATTCTAAGAGAGTGACAGCATATGAGAAGCCTATAGAACTTAAGAGTCATAATTCACAGCCTGCAATAAAAACAAGCTCACAAGAAAGAAGTGGTTTACAGAATCATCATGGGTATAAGAGGGAAACATTCCAAGATAACCGAAAGGAATCAGTGACTTTGAGGAGCGTAACCAAAACTAGTGACTTTGAGCAGGTCCCCTTGATGAATCATAACGAAAAACATTGTAAATCTTCTGTACCCACAAGGATAGTTATCTTGAAGCCTGGCCCTGATAGGAGTGCCGGCAGTGAAGAGTCTTGGGCTGGTTCATCTGAGATTGTAGAAGAGGAAGGGAGTATTGAAGATTTTCTTGAGGAGGTAAAGGAAAGGCTGAGATTTGAAATGCAAGGAAAGAGTACTAAAAGGGATATTGTGGTCAGAGGTGGTGGGATTGAGACCCCTTTCAGTGAAAGGCCCTCAAACCCGAAACAAATTGCTCGTCATATAGCAAAACAGGTCCGAGAAAGTGTTACTAGGGACCTTGGAATGAATTTGCTCCGATCAGAATCGACCAGATCATATAGAAGTGATATTCAGGTCAATGGACCAGGTTCCCCAGAGTTCATCAACAGAGACACCAGGAAATTCTTGTCAGAGAGACTGAGGAATGTCTTAAAGGGGGAAACACATGTTGATGTCCCCACGATTGTCAGTAGCAGCTTGAGAGCTTCCATGTTAAATAGTGAGGGGAGCAGATTGAGACCAATTGGAGATGTTTTGAAGACTGGAAACAGGGGGAACTACTGGGAAAATGTGAAAGATGAACTGGAAATGCAAACCAGATCTTTCAGACATGGACAAAAGAATGATGAGGTGCTTCACATGGGAGAAATGTCCCCAAGGAACCTCATAAGATCTTTATCGGCACCAGTATCAGGAACTTCATTTGGGAAGCTTCTTTTAGAGGACCGGCACGTTTTAACGGGGGCCCACATCAGGAGGAGACATGAAGCCACTGAGAATATTTCAGTGGAAGTGAGAAAAACCAGGAAAGAAAGGTTCAGTTTTAGAGGGAAAGTTTCGAATTTTAGATACAGGTTTACTCTTAAAGGTAAACTGTTTGGCCGGAAGATCCAATCAGTGGAGGAATTAGGGAGCAATGACTCCGACTCTGTGAAGGATATTATGAGTGGACCAACTGTTGTGATGAACCTCGGAAATGCACAGGAGAACTCAACTGAGGTGCCTCCTAGTCCTGCATCAGTGTGCAGCAGTGCTCACGAAGAGCTATGTAGGCCAACAGATCATCCGAGCCCAATCTCTACATTAGATGTGCCTTTGATAGAAGATCACACTGTGCCGCAGGTTTTCAGAGAGATCAGCTCCAACCTTCATGAGCTTAGGAGACAATTGCACCAACTTGAGTTCGACGGGTCTGAAGACATGGCATTAGATGAGGAGCCCCTCGAGGCTGAAATAGTTGAGTTAGAAGGCCAAGCTGAAGCTTACATAAGAGATCTCCTTCTTGTTTCTGGGTTGTACGATGGATCATCCGATCGGTCTTTTTCAAGATGGGACACACTTTCCAAGCCGATTGGCAGCTGGGTCTTTGAGAAAGTGGAAGAATCTTACAGGAAAAAAGGCGAGGAGAATGAAGGAGATACCAAGGATCATAGTGAGATTAAGGTAAACCATAAGGTGCTGTTTGATTTGTTAAATGAAGCACTATCAATCATACTTGGACCTTCTCTGACCATGTCTACATTCAAGAGAAAGGTTATTGGTCCCTCCATATTGCAGATACCGCCGCCACGTGGAAAGAAATTGTTGGATGGTGTGTGGCGGATGATCCGCATGTATGTGTATCCTCCATCTGATTGCTCCTTTTATTCACTAGACAGCATGGTGGCCCGCGATCTGGGGATGACCCCTTGGTCAGGTATGATGCATGATGATGTTGATGTAATGGGCAGGGAGATGGAGAGATTGATTCTAGGGGAGTTGATTGAGGAAACTGTGAGGGATATGTGGTTATAG 2718 0.4426 MGGLLHLFDFNQGSTSRKLLTHKKHVDGLEAPRNSLELPIETSQCYDAMGDNVPYSYQVKQNSSKDNCYPNGTSMKKLIDEEISKEPESRRNVPSVVARLMGMDMLPSDTKPAILVKERKENTGNNFPRKEQIQNGSIRRSPLGLKPSKQTEYDLLPHSKERDPDQSSNNLKFGKPRPREHPQEEQLQKFKKEFEAWQAARVWESSRVVELGSIPRQWLAQEHLNKEKMALYADSKRVTAYEKPIELKSHNSQPAIKTSSQERSGLQNHHGYKRETFQDNRKESVTLRSVTKTSDFEQVPLMNHNEKHCKSSVPTRIVILKPGPDRSAGSEESWAGSSEIVEEEGSIEDFLEEVKERLRFEMQGKSTKRDIVVRGGGIETPFSERPSNPKQIARHIAKQVRESVTRDLGMNLLRSESTRSYRSDIQVNGPGSPEFINRDTRKFLSERLRNVLKGETHVDVPTIVSSSLRASMLNSEGSRLRPIGDVLKTGNRGNYWENVKDELEMQTRSFRHGQKNDEVLHMGEMSPRNLIRSLSAPVSGTSFGKLLLEDRHVLTGAHIRRRHEATENISVEVRKTRKERFSFRGKVSNFRYRFTLKGKLFGRKIQSVEELGSNDSDSVKDIMSGPTVVMNLGNAQENSTEVPPSPASVCSSAHEELCRPTDHPSPISTLDVPLIEDHTVPQVFREISSNLHELRRQLHQLEFDGSEDMALDEEPLEAEIVELEGQAEAYIRDLLLVSGLYDGSSDRSFSRWDTLSKPIGSWVFEKVEESYRKKGEENEGDTKDHSEIKVNHKVLFDLLNEALSIILGPSLTMSTFKRKVIGPSILQIPPPRGKKLLDGVWRMIRMYVYPPSDCSFYSLDSMVARDLGMTPWSGMMHDDVDVMGREMERLILGELIEETVRDMWL* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00789 905 Coils Coil 684 704 - -
Eupl13g00789 905 MobiDBLite consensus disorder prediction 153 186 - -
Eupl13g00789 905 MobiDBLite consensus disorder prediction 118 186 - -
Eupl13g00789 905 MobiDBLite consensus disorder prediction 245 289 - -
Eupl13g00789 905 MobiDBLite consensus disorder prediction 267 288 - -
Eupl13g00789 905 MobiDBLite consensus disorder prediction 127 141 - -
Eupl13g00789 905 MobiDBLite consensus disorder prediction 251 266 - -
Eupl13g00789 905 Pfam Domain of unknown function (DUF4378) 729 898 IPR025486 -
Eupl13g00789 905 Pfam DUF761-associated sequence motif 94 109 IPR032795 -
Eupl13g00789 905 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00789 Eupl-Chr13 11669354 11674040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00789 75 903 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 38.993 1.53e-154 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00789 - - nnu:104590217 1140.95