Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00785 ATGAAAGGAGGCAGATCGAAAGCCGACACGGCCAAAAAAGCCGAAAGCAAGCTTTCGGTTAAGAGGAAAGGTCCCGCAAACGATAGAGCGGGCAAAAAAACGACGAAGAAGGAGAAGCCAGCGAAGGATCCTAACAAGCCTAAAAGGCCTGCCAGTGCTTTCTTTGTTTTCATGGAAGAGTTCAGGAAGCAGTACAAGGAGAAACACCCTAACAATAAATCCGTCTCCGTTGTCGGCAAAGCTGGAGGAGATAAATGGAAGTCGTTGTCCGAAGCTGAAAAAGCTCCGTATGTAGCGAAGGCAGAGAAAAGGAAGACCGAATACAACAAGAACTTGCAGGCCTACAATAAGAAGCAGGCCGAAGGAGAAAACGCGGTAGACGACGAAGTCGAGTCCGACAAGTCAAAGTCTGAAGTGAACGACGAGGATGACGAGGAGGAGAGCGGAGAGGAGGAAGACGACGACGACGAGTAG 474 0.4958 MKGGRSKADTAKKAESKLSVKRKGPANDRAGKKTTKKEKPAKDPNKPKRPASAFFVFMEEFRKQYKEKHPNNKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKNLQAYNKKQAEGENAVDDEVESDKSKSEVNDEDDEEESGEEEDDDDE* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00785 157 MobiDBLite consensus disorder prediction 138 157 - -
Eupl13g00785 157 Pfam HMG (high mobility group) box 47 116 IPR009071 -
Eupl13g00785 157 MobiDBLite consensus disorder prediction 1 46 - -
Eupl13g00785 157 MobiDBLite consensus disorder prediction 1 51 - -
Eupl13g00785 157 MobiDBLite consensus disorder prediction 121 137 - -
Eupl13g00785 157 SMART hmgende2 46 117 IPR009071 -
Eupl13g00785 157 SUPERFAMILY HMG-box 39 120 IPR036910 -
Eupl13g00785 157 MobiDBLite consensus disorder prediction 64 157 - -
Eupl13g00785 157 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 152 IPR031061 -
Eupl13g00785 157 CDD HMG-box_AtHMGB1-like 48 108 - -
Eupl13g00785 157 Coils Coil 98 118 - -
Eupl13g00785 157 Gene3D High mobility group box domain 29 132 IPR036910 -
Eupl13g00785 157 MobiDBLite consensus disorder prediction 86 111 - -
Eupl13g00785 157 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 47 116 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00785 Eupl-Chr13 11626233 11627487 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Eupl13g00785 HMG_box 1.3e-21 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00785 K25507 - ming:122090575 216.468