Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00781 ATGAGTTGTTTTTCTTGCATGAGTCCTCACCGGAAGGTTGTAAGCAAGATTGAAGACAGTACCGGCATTCGATCTAATCCTTGCTATTCGGATTCCCCAGAAAATGGGAGAGGAAATGCATCTTTCAAGAGTAGGGAAAAGGGCAGGAGGAAAGCCTCGTTCGACAGTGAAGGCAAAGATAGAAACAGCTCAAAATTCAGTGCTGCTTATAGCTTCACATTTCGCGAACTTGCGACTGCAACAAGGAATTTTAAGGATACTAATTTGCTTGGGGAAGGGGGTTTCGGAAGGGTTTATAAAGGACACCTCGAAACAGGCCAGATTGTTGCAATCAAACAACTTGATCCGAATGGCCTTCAGGGGAATCAGGAATTTATTGTGGAGGTTCTTATGTTAAGCCTTCTACACCATTCTAATCTTGTCAATTTGACTGGCTACTGCACCGATGGAGATCAAAGGCTTTTGGTTTACGAGTACATGCCAATGGGAAGCTTGGAGGATCATCTGTTTGAAGTGAATCCGGACGCAGAACCATTGGGGTGGGACACACGAATGAAGATTGCTGTTGGTGCTGCTCAGGGCCTTGAATATCTTCATTGTAAAGCCAACCCGCCCGTTATTTATCGTGACTTGAAATCTGCAAATATATTGTTGGACAATCACTTCAATCCAAAGCTTTCTGATTTTGGACTTGCTAAATTGGGTCCTGTTGGTGACAAAACTCATGTTTCAACAAGGGTGATGGGGACATATGGCTACTGTGCCCCAGAATATGCCATGAGTGGTAAGTTGACTCTCAAGTCCGATGTCTATAGCTTTGGCGTGGTTCTGTTGGAGCTGATCACTGGGCGGAAAGCAATCGACTATACTAGGATGCAGGGGGAGCAGAATCTAGTTTGTTGGTCTCGTCCTCTCTTCAAGGACCGGAAGAAGTTTATTCAGTTGGTTGATCCCGTACTGCAAGGCCGCTTTCCTGTCCGTTGTTTGCACCATGCCATCGCAATCACTGCAATGTGTCTTCAAGAGCAACCAAATTTTCGCCCCCTCATAGGTGATGTCGTTGTAGCACTCGAGTACTTGGCCTCTCAACCATACAACTCTGAAGCCCATACTGGTGGGACCCGCAGTCCCCCACCATCATCACCTTCACATCGAGACGGGGGCATATTTCGTTGGGAAACACATGGTAGAAAGAGTTCTGCATCTGTCTAA 1212 0.4612 MSCFSCMSPHRKVVSKIEDSTGIRSNPCYSDSPENGRGNASFKSREKGRRKASFDSEGKDRNSSKFSAAYSFTFRELATATRNFKDTNLLGEGGFGRVYKGHLETGQIVAIKQLDPNGLQGNQEFIVEVLMLSLLHHSNLVNLTGYCTDGDQRLLVYEYMPMGSLEDHLFEVNPDAEPLGWDTRMKIAVGAAQGLEYLHCKANPPVIYRDLKSANILLDNHFNPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMSGKLTLKSDVYSFGVVLLELITGRKAIDYTRMQGEQNLVCWSRPLFKDRKKFIQLVDPVLQGRFPVRCLHHAIAITAMCLQEQPNFRPLIGDVVVALEYLASQPYNSEAHTGGTRSPPPSSPSHRDGGIFRWETHGRKSSASV* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00781 403 MobiDBLite consensus disorder prediction 367 403 - -
Eupl13g00781 403 SMART serkin_6 84 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00781 403 Gene3D Phosphorylase Kinase; domain 1 54 159 - -
Eupl13g00781 403 Gene3D Transferase(Phosphotransferase) domain 1 160 373 - -
Eupl13g00781 403 MobiDBLite consensus disorder prediction 24 63 - -
Eupl13g00781 403 MobiDBLite consensus disorder prediction 367 381 - -
Eupl13g00781 403 FunFam probable serine/threonine-protein kinase RLCKVII 56 159 - -
Eupl13g00781 403 PANTHER OS07G0668900 PROTEIN 28 369 - -
Eupl13g00781 403 SUPERFAMILY Protein kinase-like (PK-like) 64 358 IPR011009 -
Eupl13g00781 403 MobiDBLite consensus disorder prediction 40 62 - -
Eupl13g00781 403 MobiDBLite consensus disorder prediction 24 39 - -
Eupl13g00781 403 ProSitePatterns Protein kinases ATP-binding region signature. 90 112 IPR017441 GO:0005524
Eupl13g00781 403 FunFam Serine/threonine-protein kinase PBS1 160 375 - -
Eupl13g00781 403 Pfam Protein kinase domain 85 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00781 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Eupl13g00781 403 ProSiteProfiles Protein kinase domain profile. 84 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00781 403 CDD STKc_IRAK 90 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00781 Eupl-Chr13 11562881 11569638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00781 1 380 Glycoside Hydrolase AT3G07070 60.733 4.63e-162 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Eupl13g00781 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00781 - - nnu:104590211 604.364