Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00774 ATGGGTAGATCCGACGAGAACAATCCGGGTGCGATTGGACCCCCAAATCTCCAAGGAGCTCTTGGAATGGGAGGTGGGAAGTTCGTCCCGGAACTTGGCCAAAACCGAAGAGCTTTGAGTAACATTAACCGGAATTTAGTGGGGCCTCCACCTTATCCTTGTGCAGTCAACAAAAGAGGACTGTTAGAAAAACAACCAATCTGTGACAATAATCCGCCCATTCCGGTGCATCGACCAATTACAAGGAAGTTTGCCGCAGAAATGGTAAACAATCAGCAATTATGCCCTGAGGAAACTAAGAAACCAGTCACATTGATCCCGAGTCCAATTGGATCGGATGATTATACCATCATAGACGTGGAAGAGTACAAGGAGACTGGCAACTTCCTTGTTCCGATGTTTGTGAGGCACACGGAAGCGATGCTAGATGAAATCGATCAGATGGAGGAGGTCGAAATGGAGGATATAGTGGTGGAGTCCATTGTGGACATCGACAGCTGCGATTCGAAGAACCCACTTGCAGTTGTTGATTATGTCGAAGATATTTACTCCTACTACAGAAAAACTGAGAATTCTAGCTGTGTCTCTCGGAATTATATGGCGCAGCAATTTGACATTAATGAGAAGATGAGGGCTATCCTCATTGACTGGCTAATCGAGGTACACTACAAGTTTGAACTGATGGACGAGACATTATTCCTTACTGTCAATCTTATAGACAGATTCTTAGCCCAGAAAACAGTGGTGAGAAAGAAGCTTCAGTTGGTTGGGGTGACAGCCTTGCTCTTGGCATGCAAGTATGAGGAAGTTTCAGTCCCTGTGGTGGAGGATCTAATTTTAATATCGGACAAGGCTTACACCAGGAAGGAAGTTCTTGAAATGGTAATTTCATTTTTCATTGTCCTGATCAACTTGATGGTTCTTAGTGCTTTTTTCCTTTCCCCCATTAGTAAATATTCCCACTTTCCATGTTTGCAGGAGAAATTGATGGTCAACACATTACAGTTCAACATGTCTGTTCCGACTCCGTATGTGTTCATGAAGAGGTTCCTCAAAGCGGCTCAATCTGATAAGAAGCTCGAGCTTCTCTCATTCTTCATGATTGAGCTTTGCTTGGTTGAGTACGAAATGCTCAAGTTCCCACCATCTCTATTAGCTGCAGCAGCCATCTACACTGCTCAGTGTAGTCTTAATAAGTATAAGCATTGGAGTAAGACCAGCGAGTGGCATGCTACTTACTCAGAAGATCAGCTTCTGGAATGTGCGAGATTGATGGTTTCGTTCCATCAGAAGGCAGGAACAGGGAAACTAACAGGCGTACACAGGAAATATGGTACATTGAAGTTTGGTTGTGCAGCGAAATCTGTACCAGCTCAATTTCTCCTAGAGACCAGACTCTGA 1401 0.4418 MGRSDENNPGAIGPPNLQGALGMGGGKFVPELGQNRRALSNINRNLVGPPPYPCAVNKRGLLEKQPICDNNPPIPVHRPITRKFAAEMVNNQQLCPEETKKPVTLIPSPIGSDDYTIIDVEEYKETGNFLVPMFVRHTEAMLDEIDQMEEVEMEDIVVESIVDIDSCDSKNPLAVVDYVEDIYSYYRKTENSSCVSRNYMAQQFDINEKMRAILIDWLIEVHYKFELMDETLFLTVNLIDRFLAQKTVVRKKLQLVGVTALLLACKYEEVSVPVVEDLILISDKAYTRKEVLEMVISFFIVLINLMVLSAFFLSPISKYSHFPCLQEKLMVNTLQFNMSVPTPYVFMKRFLKAAQSDKKLELLSFFMIELCLVEYEMLKFPPSLLAAAAIYTAQCSLNKYKHWSKTSEWHATYSEDQLLECARLMVSFHQKAGTGKLTGVHRKYGTLKFGCAAKSVPAQFLLETRL* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00774 466 SMART Cyclin_C_2 341 458 IPR004367 -
Eupl13g00774 466 SUPERFAMILY Cyclin-like 340 458 IPR036915 -
Eupl13g00774 466 CDD CYCLIN_AtCycB-like_rpt1 159 336 - -
Eupl13g00774 466 FunFam G2/mitotic-specific cyclin 195 306 - -
Eupl13g00774 466 SUPERFAMILY Cyclin-like 170 294 IPR036915 -
Eupl13g00774 466 Gene3D - 195 302 - -
Eupl13g00774 466 ProSitePatterns Cyclins signature. 211 242 IPR006671 -
Eupl13g00774 466 SMART cyclin_7 216 300 IPR013763 -
Eupl13g00774 466 SMART cyclin_7 345 427 IPR013763 -
Eupl13g00774 466 PANTHER CYCLINS 149 431 IPR039361 -
Eupl13g00774 466 Pfam Cyclin, C-terminal domain 341 457 IPR004367 -
Eupl13g00774 466 PIRSF Cyclin_A_B_D_E 34 132 IPR046965 GO:0016538|GO:0044772
Eupl13g00774 466 PIRSF Cyclin_A_B_D_E 119 298 IPR046965 GO:0016538|GO:0044772
Eupl13g00774 466 PIRSF Cyclin_A_B_D_E 319 466 IPR046965 GO:0016538|GO:0044772
Eupl13g00774 466 FunFam G2/mitotic-specific cyclin-1 330 453 - -
Eupl13g00774 466 CDD CYCLIN_AtCycB-like_rpt2 341 457 - -
Eupl13g00774 466 MobiDBLite consensus disorder prediction 1 25 - -
Eupl13g00774 466 Pfam Cyclin, N-terminal domain 181 294 IPR006671 -
Eupl13g00774 466 Gene3D - 327 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00774 Eupl-Chr13 11353916 11358316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00774 1 462 Core Cell Cycle Gene Families AT1G20610 59.957 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00774 K21777 - nnu:104587119 664.84