Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00766 ATGGCGAAGAGATCGCTGACAGAAGCGAAGAGACGCGACGAATACGACAAAGAGGAAGAGGAAGAGGAAGACGAAGTGACTGAAGAAGAAGAAGAAGACGATGAAGGAGAGGAGGAGGGAGAGGAGAGGAGGAAGAGGATTTTAATTAGGTTTTCTGGAGAGAGAAGGGGAGTTTCATCGTCGGTGAGCTCGCAGACGATGCTTTGTTGTCAGGCTGACGATTGCGATGCGGACTTGGGAGAGGCAAAGAGGTACCACCGGCGGCATAAGGTGTGCGAGCGCCACGCCAAGGCGGCAGTGGTTTCCGTCGGTGGCGTCGACCAGAGGTATTGTCAGCAGTGCAGCAGATTCCATGAAATATCACAGTTTGATGACAACAAAAGAAGTTGTCGGAAGCGGTTGGCTGGCCACAATGAACGCCGGAGGAAGACCCATCCAGACCTACTGACAGAGGATGTAGGACGGAGACCACTCTTAGACATGAAAGATAGGTCATTGAGGTCTACAGGTCACCACGAAAGCACACAAATGAGACTTAGAGGTAACCCCAGTTTCAGGCATTTTCAGATAAGGTGA 576 0.5122 MAKRSLTEAKRRDEYDKEEEEEEDEVTEEEEEDDEGEEEGEERRKRILIRFSGERRGVSSSVSSQTMLCCQADDCDADLGEAKRYHRRHKVCERHAKAAVVSVGGVDQRYCQQCSRFHEISQFDDNKRSCRKRLAGHNERRRKTHPDLLTEDVGRRPLLDMKDRSLRSTGHHESTQMRLRGNPSFRHFQIR* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00766 191 MobiDBLite consensus disorder prediction 137 191 - -
Eupl13g00766 191 ProSiteProfiles Zinc finger SBP-type profile. 67 144 IPR004333 GO:0003677
Eupl13g00766 191 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 27 146 IPR044817 GO:0003677
Eupl13g00766 191 Pfam SBP domain 70 143 IPR004333 GO:0003677
Eupl13g00766 191 Coils Coil 3 39 - -
Eupl13g00766 191 MobiDBLite consensus disorder prediction 17 38 - -
Eupl13g00766 191 Gene3D - 60 131 IPR036893 GO:0003677|GO:0005634
Eupl13g00766 191 MobiDBLite consensus disorder prediction 1 16 - -
Eupl13g00766 191 SUPERFAMILY SBT domain 68 149 IPR036893 GO:0003677|GO:0005634
Eupl13g00766 191 MobiDBLite consensus disorder prediction 140 174 - -
Eupl13g00766 191 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00766 Eupl-Chr13 11237707 11241136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00766 70 191 SBP-box Gene Family AT3G15270 51.938 1.69e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Eupl13g00766 SBP 3.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00766 - - vvi:100257602 175.637