Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00758 ATGGGCTGCTGTGAATCGTCCTTCTTAAAAGAAACACACCCAGAAAAATACGACGACCACCACCACAACCTACCCTTCAATCATCATCCACCCGCCGGCGCTACCGACGCAGCGGGCGGCGCTACCGGTGGAGAAATTCCGCCCTTCTCAGAGTTCTCGCTCTCCGACCTGAAAGCCGCCACTAACAACTTCAGCTCCGACTACATCGTCTCTGAGAGCGGCGAAAAAGCCCCCAATCTCGTCTACAAGGGCCGTCTCCAGAATCGTCGATGGATCGCCGTCAAGAAATTCACCAAGATGGCCTGGCCCGAACCCAAGCAGTTCGCGGAGGAGGCGCGTGGCGTCGGGAAGTTGCGGCATCGGAGGCTTGCCAATTTGATTGGGTACTGCTGTGACGGCGATGAGCGGCTGCTCGTTGCAGAGTACATGCCCAATGATACACTTGCGATGCATTTATTTCACTGGGAAAATCAAACCATTGAGTGGGCCATGCGTCTAAGAGTTGCTCTGTATATTGCAGAAGCCTTAGATTATTGTAGTACTGAAGGCCGACCACTTTATCATGACCTGAACGGTTATAGGGTTCTCTTTGATGAGGATGGTGATCCACGGCTTTCCTGTTTTGGCCTTATGAAAAATAGTAGGGATGGGAAAAGTTATAGCACAAATCTGGCCTACACACCTCCTGAATATCTGAGAAATGGGAGGGTTACTCCAGAAAGTGTTATCTTCAGCTTTGGCACTGTCCTCCTGGATCTTCTTAGCGGAAAGCACATCCCTCCAACTCATGCTCTTGATATGATACGAGGCAAGAACATCCTTCTTTTAATGGATTCGCATTTAGAGGGAAAATTTTCAATAGAAGAGGCAACTGTGGTTGTTGGCCTTGCCTCTCAATGTTTGCAATATGAACCTAGGGAGAGGCCGAATCTGAAAAAGCTTGTTGCGACACTTGCGCCACTGCAAACCAAACCTGATGTACCGTCTTATATGATGCTGGGCATACCAAAACAAGAGGAAGCCCCTCCTACCCCCAAGCACCCACTGTCGCCTATGTGTGAGGCCTGTCAACGAATGGACCTCACTGCCATCCACCAGATTTTGGTGATGACACACTACAGAGATGATGAAGGAACCAATGAGTTGTCTTTCCAAGAGTGGACACAACAAATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTTTGCATTCCGTGATAGAGATTTTAAAACTGCCATTGACTGTTATTCTCAGTTCATAGATGTAGGAACGATGGTTTCACCAACCGTTTATGCAAGGCGGAGTCTCTGTCATCTCCTTTGTGACCAACCAGATGCTGCTCTCCGAGATGCAATGCAAGCACAATATGTTTACCCAGAATGGCCCACAGCCTTCTACATGCAGGCAGTTGCCCTTGCCAAGCTGGACATGCACAAGGATGCAGCTGACATGTTGAATGAAGCTGCTGGACTAGAAGAAAAGAGGCAACGAGGCGGGAGAGGATCCTGA 1512 0.4934 MGCCESSFLKETHPEKYDDHHHNLPFNHHPPAGATDAAGGATGGEIPPFSEFSLSDLKAATNNFSSDYIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEPKQFAEEARGVGKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAMHLFHWENQTIEWAMRLRVALYIAEALDYCSTEGRPLYHDLNGYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPTHALDMIRGKNILLLMDSHLEGKFSIEEATVVVGLASQCLQYEPRERPNLKKLVATLAPLQTKPDVPSYMMLGIPKQEEAPPTPKHPLSPMCEACQRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDFAFRDRDFKTAIDCYSQFIDVGTMVSPTVYARRSLCHLLCDQPDAALRDAMQAQYVYPEWPTAFYMQAVALAKLDMHKDAADMLNEAAGLEEKRQRGGRGS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00758 503 MobiDBLite consensus disorder prediction 15 42 - -
Eupl13g00758 503 Gene3D Tetratricopeptide repeat domain 392 499 IPR011990 GO:0005515
Eupl13g00758 503 FunFam probable serine/threonine-protein kinase At5g41260 144 335 - -
Eupl13g00758 503 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 42 498 IPR045845 GO:0004672|GO:0009742
Eupl13g00758 503 Gene3D Phosphorylase Kinase; domain 1 43 142 - -
Eupl13g00758 503 ProSiteProfiles Protein kinase domain profile. 67 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00758 503 SUPERFAMILY Protein kinase-like (PK-like) 48 328 IPR011009 -
Eupl13g00758 503 FunFam probable serine/threonine-protein kinase At4g35230 40 142 - -
Eupl13g00758 503 Pfam Protein tyrosine and serine/threonine kinase 81 318 IPR001245 GO:0004672|GO:0006468
Eupl13g00758 503 FunFam probable serine/threonine-protein kinase At4g35230 392 501 - -
Eupl13g00758 503 SUPERFAMILY TPR-like 397 493 IPR011990 GO:0005515
Eupl13g00758 503 Gene3D Transferase(Phosphotransferase) domain 1 144 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00758 Eupl-Chr13 11040395 11054547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00758 52 330 Glycoside Hydrolase AT3G07070 35.048 1.01e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Eupl13g00758 PK_Tyr_Ser-Thr 3.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00758 K14500 - nnu:104603720 916.376