Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00753 ATGGATAAAACAACGCCAGAGCTAGAGCTGCCCGGGTTCAGGTTCCACCCCACCGAAGAAGAGCTCCTCGACTTCTACCTCAAAAACATGGTTTTCGGGAAAAAACTCCGGTTCGATGTTATCCGTTTCCTCAACATCTATCATCACCACCCTTGGGAATTGCCTGGGTTGGCTAAGCATGGGGAACGAGAGTGGTACTTCTTTGTGCCGAGAGACAGGAAGCATGGTAATGGAGGAAGGCCTAATCGGACGACGGAGAACGGGTTTTGGAAGGCAACTGGTTCTGACCGTTCAATACGAAGCTTATCGGACCCGAGTCGTCTTATTGGGCTAAGGAAGACTCTTGTGTTCTACAAGGGTAGAGCGCCACGTGGCTGCAAAACTGACTGGGTCATGAACGAGTACCGATTGCCCGATACCTGCACCTTACCAAAGGAGGACATAGTATTGTGCAAGATTTACCGAAAGGCGACGTCTTTAAAGGTGTTGGAGCAGAGGGCAGCCATGGAAGAAGAAATGAAGATGTCTCATGCTGTTTCTCCATCCCCAACAGTGGATACTGTCTCATTTTCCGAGCAACTAGAGAACTTCCCGACACTAATCCCGGCCAATGACATTGTTTTCAAGACAGAAGAGCAAGAAGAAGATGAGAAGGAAAGCAAAGAGGCATCATCGTCCCTACAAGTCGGACTGCAAAAGGGGAACTTATCCGAGCTACAATTGCCCAAAATCAGCATGGATTGGATGCAGGACCCGTTCTGGACCCAGTTACGTAGCCCATGGCTAGATAACTTGACACCCTACGCAAACATACTTAACTTCTAA 825 0.4873 MDKTTPELELPGFRFHPTEEELLDFYLKNMVFGKKLRFDVIRFLNIYHHHPWELPGLAKHGEREWYFFVPRDRKHGNGGRPNRTTENGFWKATGSDRSIRSLSDPSRLIGLRKTLVFYKGRAPRGCKTDWVMNEYRLPDTCTLPKEDIVLCKIYRKATSLKVLEQRAAMEEEMKMSHAVSPSPTVDTVSFSEQLENFPTLIPANDIVFKTEEQEEDEKESKEASSSLQVGLQKGNLSELQLPKISMDWMQDPFWTQLRSPWLDNLTPYANILNF* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00753 274 Gene3D NAC domain 18 160 IPR036093 GO:0003677|GO:0006355
Eupl13g00753 274 FunFam NAC domain-containing protein 67-like 18 160 - -
Eupl13g00753 274 SUPERFAMILY NAC domain 10 156 IPR036093 GO:0003677|GO:0006355
Eupl13g00753 274 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Eupl13g00753 274 ProSiteProfiles NAC domain profile. 9 156 IPR003441 GO:0003677|GO:0006355
Eupl13g00753 274 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00753 Eupl-Chr13 11020743 11022511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00753 7 271 NAC Transcription Factor Family AT2G17040 60.791 2.64e-115 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl13g00753 NAM 1.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00753 - - jre:109012146 409.453