Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00746 ATGGCGCACGGTAGCATGTCGATCGACCGTAGCAGCGGCTTCAGCCAGTCGAATTACGTCTTCTACAGCAAGCGGAAGCCCATACCTCTTCCCTCCAACGAAGCCCTCGACCTCACAACCTTCATCTCTTCGCGGGCCCACAATGGAAAGATCGCCTACATCGACGCCACTACCGGCCGCTGCCTCACCTTCCCGGAAGTATGGCGAGCAGTTGAGTCCATCGCCTCGTGTCTCTCCGACCTCGGGATCCGCAAAGGCCATGTCGTCCTCCTCCTCTCTCCAAATTCCATATTTTTCCCTGTAATCTGTCTCTCCGTCATGTCTCTAGGCGCCATCATCACCACGACCAACCCACTCAACACGACTCAAGAAATCGGTAAGCAAATCGCCGATTCCAAACCGATTCTCGCCTTCACGACTCAGTCTCTCCTCCCGAAACTCGCCAGCTCAAATCTCCCCATCGTTCTCATCGGAGAACTCGGTAACTCGGCGAATAACTCGAAAATCGTTTCTTCGTTAGAAGACATGATGAAGAAGGAACCGAGTCCTAGCCGAGTAAAGTACCGAGTCAGCCAAGACGACACGGCTACTCTGCTGTACTCGTCCGGTACGACCGGTGCGAGCAAGGGCGTAGTGTCATCGCACCGGAACCTCATCGCGATGGTTCAAACAATCCTGAGCCGGTTTCGGTTAGAAGACGGAGAGCAGAGCTTCATCTGCACAGTTCCTATGTTCCACATCTACGGTCTAGCTGCGTTCGCGTCTGGGCTGCTGGCCTCTGGATCGACGATTGTGGTGCTTTCGAGATTCGAGATGGATGAGATGCTATCTGCGATGGAGAAGTACCACGCAACGTACTTGCCTCTAGTGCCGCCGATACTCATCGCGATGATGCATAACGCTGATAAGATTCGGTCGAGATACAATTTGGGGTCGTTGCAGTCTGTTTTATCCGGTGGTGCGCCTTTGAGTAAGGAAGTGATTGAGGGGTTTACGACGCAGTTTCCGACGGTGAATATTCTCCAGGGGTATGGGCTGACGGAGACAGCGGGGATCGGAGCGTCGACAGATTCGCTGGAGGAGAGCAGGCGGTATGGCACGGCTGGGTTGTTGTCGCCAAACATGGAAGCGAAGATCGTTGACCCGCAGACGGGAGAGGGGTTGCCGGTGAATAAGACGGGTGAGCTATGGCTTCGCGGTCCTACCGTCATGAAAGGTTATTTCAGCAACCCAGAAGCAACTACATCAACTCTAGATTCTGAGGGATGGCTGAGAACGGGTGATCTCTGCTACATTGACAACGATGGATACATCTTCGTGGTTGATAGGTTGAAGGAGCTGATCAAATACAAGGGCTATCAGGTCCCTCCAGCAGAGTTAGAAGCATTGCTGCTTTCTCACCCAGAAATCGCTGATGCTGCTGTCATTCCGTTCCCGGATGAGGAGGTTGGACAGTATCCCATGGCATACGTGGTAAGAAAAACCGGAAGTGATTTGTCAGAGAGTGCAATCATGGACTTTGTAGCGCAACAGGTAGCTCCATACAAGAGAATCCGACGAGTTGCATTTGTGTCTGCAATCCCAAAGAACCCATCTGGCAAGATTCTTAGGAAGGATCTTATTAAGCTTGCAACCTCGAAGCTTTGA 1647 0.5246 MAHGSMSIDRSSGFSQSNYVFYSKRKPIPLPSNEALDLTTFISSRAHNGKIAYIDATTGRCLTFPEVWRAVESIASCLSDLGIRKGHVVLLLSPNSIFFPVICLSVMSLGAIITTTNPLNTTQEIGKQIADSKPILAFTTQSLLPKLASSNLPIVLIGELGNSANNSKIVSSLEDMMKKEPSPSRVKYRVSQDDTATLLYSSGTTGASKGVVSSHRNLIAMVQTILSRFRLEDGEQSFICTVPMFHIYGLAAFASGLLASGSTIVVLSRFEMDEMLSAMEKYHATYLPLVPPILIAMMHNADKIRSRYNLGSLQSVLSGGAPLSKEVIEGFTTQFPTVNILQGYGLTETAGIGASTDSLEESRRYGTAGLLSPNMEAKIVDPQTGEGLPVNKTGELWLRGPTVMKGYFSNPEATTSTLDSEGWLRTGDLCYIDNDGYIFVVDRLKELIKYKGYQVPPAELEALLLSHPEIADAAVIPFPDEEVGQYPMAYVVRKTGSDLSESAIMDFVAQQVAPYKRIRRVAFVSAIPKNPSGKILRKDLIKLATSKL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00746 548 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
Eupl13g00746 548 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Eupl13g00746 548 Pfam AMP-binding enzyme 45 450 IPR000873 -
Eupl13g00746 548 FunFam 4-coumarate--CoA ligase 2 446 547 - -
Eupl13g00746 548 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 15 542 - -
Eupl13g00746 548 Gene3D - 18 445 IPR042099 -
Eupl13g00746 548 Gene3D - 446 547 IPR045851 -
Eupl13g00746 548 SUPERFAMILY Acetyl-CoA synthetase-like 44 546 - -
Eupl13g00746 548 FunFam Long-chain-fatty-acid--CoA ligase FadD 22 445 - -
Eupl13g00746 548 CDD 4CL 30 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00746 Eupl-Chr13 10914964 10920588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00746 5 548 Monolignol Biosynthesis Gene Families AT1G20480 62.795 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00746 K10526 - nnu:104587082 898.656