Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00740 ATGGAGGAGGAACGGCCACAGAAAACAGAAGGAAAACCCATTCGATGCAGAGCTGCGGTTTGCAGAAAAGCAGGGGAGCCTCTAAAGATAGAGGAGGTGGTGGTGGCTCCGCCAAAAGCATGGGAAGTACGGATTAAGATTATCTGCACCTCGCTAAGTTTCAGCGATGTCACGTTCTGGAAAATGAAAGATCCTCCTGGAATTTTCCCGACGATATTTGGTCACGAGGCTGTGGGGGTTGTGGAGAGCGTGGGGGATCATGTACAGGAAGTGAAGGAAGGAGACGTAGTGATCCCGACATTTCTATCCGATTGCCGGGAATGCAGAGACTGCAAGTCTGCGAAGAGCAATCTGTGCTCAAAGCTCCCCTTCAGAATCTCGCCATGGATGCCTAGAGATGGAACAAGCCGATTCACTGATACTAAAGGGGAGGTCTTGTACCATTTTGTAAACGTGTCAAGTTTTAGTGAATATACTGTGGTTGATGTTGCTCACGTAACGAAAATCGACCCCTCCGCACCTCCAGACAAGGCGTGCCTGCTTGGTTGCGCGATATCGACAGGGGTAGGGGCTGCGTGGAAAACTGCTAAGGTGGAAGCGGGGTCCACTGTGGCTATATTTGGTTTAGGAGCCATCGGATTGGCGATTGCAGAGGGGTCGAGACTTTGTGGAGCTACTAGAATTATTGGCGTCGATTTGAATCCGGATAAATCTGAGATTGGTAAAAAATTTGGAGTCACAGACTTCATTAACTCAAGAGAGTGTGGGAATAAACCTGCCAGTGAGGTGATTATTGAGATGACAGATGGGGGTGCAGACTATTGCTTCGAAACCGTCGGGATGGCGTCCTTGGTGCATGAAGCACTTGCCTGTTCTCGAAAGGGTTGGGGCAAAACTGTGGTGTTGGGAGTGGACAAGCCAGACTCGCAATTAAGCATCAATTCTTTCGATCTACTTCACAGCGGCAAAAGCCTCACGGCTGCCTTGTTTGGAGGTATCAAAGCCAAATCAGATATTCCCATCCTCCTACAACGTTACATGGACAAGGAGCTTAATTTGGACGCGTTCGTCACGCACGAGGTGCGGTTTGAAGACATTAACAAAGCTTTTGATTTACTCATTGATGGGAAGAACCTCAGATGTGTGATTTGGATGGATAAATGA 1164 0.4845 MEEERPQKTEGKPIRCRAAVCRKAGEPLKIEEVVVAPPKAWEVRIKIICTSLSFSDVTFWKMKDPPGIFPTIFGHEAVGVVESVGDHVQEVKEGDVVIPTFLSDCRECRDCKSAKSNLCSKLPFRISPWMPRDGTSRFTDTKGEVLYHFVNVSSFSEYTVVDVAHVTKIDPSAPPDKACLLGCAISTGVGAAWKTAKVEAGSTVAIFGLGAIGLAIAEGSRLCGATRIIGVDLNPDKSEIGKKFGVTDFINSRECGNKPASEVIIEMTDGGADYCFETVGMASLVHEALACSRKGWGKTVVLGVDKPDSQLSINSFDLLHSGKSLTAALFGGIKAKSDIPILLQRYMDKELNLDAFVTHEVRFEDINKAFDLLIDGKNLRCVIWMDK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00740 387 SUPERFAMILY GroES-like 335 384 IPR011032 -
Eupl13g00740 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 174 348 IPR036291 -
Eupl13g00740 387 FunFam Alcohol dehydrogenase 6 19 201 - -
Eupl13g00740 387 Gene3D - 188 328 - -
Eupl13g00740 387 Gene3D - 20 381 - -
Eupl13g00740 387 FunFam S-(hydroxymethyl)glutathione dehydrogenase 188 328 - -
Eupl13g00740 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Eupl13g00740 387 Pfam Zinc-binding dehydrogenase 211 332 IPR013149 -
Eupl13g00740 387 PANTHER ALCOHOL DEHYDROGENASE 11 383 - -
Eupl13g00740 387 Pfam Alcohol dehydrogenase GroES-like domain 42 168 IPR013154 -
Eupl13g00740 387 SUPERFAMILY GroES-like 9 200 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00740 Eupl-Chr13 10867394 10871591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00740 42 373 Monolignol Biosynthesis Gene Families AT2G21730 26.000 2.28e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00740 K00121 - vvi:100264420 611.298