Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00738 ATGGCAGATGAAAATTCTCTTGAAGGTGCCAGTACGAGTGAATTTACCAGCGTAAGTTCAGAATTATCTATTGAGGTCAATGTCAAGACTCTGGATTCACAGATCTACACATTCCGGGTTGACAAAAATATGCCAGTTCCATTGTTCAAGGAGAAAATAGAAAATGTGATTGGTGTTCCAGTTGGGCAGCAACGGCTAATTTTTAGGGGAAAAGTTTTAAAGGATGATCACCTTCTCTCTGAATATCACGTGGAAGATGGGAATACACTGCATTTAGTTGCAAGGCAGCCAGTCCAATCACAACCTTCAACTGGAACAAGCTCTGGAGAGACGATTGGAAATAATGATAACCGAGGAAATGCTGCTAGTGCTGGTGCCCCCCAACATAACAGGATTGGTCAAGTTTCACACAGTGTAGTTCTCGGATCCTTCAATATTGGGGACCAAGGTGAAGGCATTGTTCCTGACTTTACTCAGATTATTGGGGCGGTTCTGAATTCTATTGGAATTGGGAACCAGACTTCCACTGGTGGGGCTAGCAACATTTTGTCCAGCATAGCTTCCAATGCATCTAGTCAAGCCTCTCAAGGCGTTGCAACAGAAGGAACACGCGGGAATGTTGGTGGCATGAGCCAGACGGGGAATCAAGTGCAACCTGGACAGCAATTTCCCCTTCATCCCTTCCAATCTCTGCCTCAGTCCCTGCAATTCCCTTTGCCAGGGGCAGCAGTAGCTGTTCCATCACACCAAATGCCCATCCCTGATTCTTTAAACACACTTTCTGAGTTCATCAACCGCATGGAGCTGGCCTTGTCACACAACGGATATCAGCCTTCTCCTTCGCCTACCAATGTTGGAGACCCACCGAGAGTGGAGCCATCTAATGCACGAGGACTGCCAACACCTGAAGCATTAAGCATCGTCATGCGACAAGCACAGCAACTTCTCAGTCGCCATGCTGTAGATGCACTTTCTCATATAGCAGGACGTTTGGAAGGAGAGGGAGGTTCTACTGATCCTGCGGTACGGAGCCAAATTCAGACCGAATCAGTGCAAGTAGGGTTGGCAATGCAACATTTAGGTGCTCTTCTTTTAGAGCTTGGACGCACGATTCTGACACTGCGTATGGGGCAGTCTCCTGCCGAATCTCTGGTGAATGCTGGGCCTGCAGTTTATATATCTCCATCAGGGCCAAATCCTATGATGGTTCAGCCCTTTGCTCTTCAAACCAGATCCCTCTTTGGTGGTCTTGCTGCTCAGGCAAATCCTGGAAATCTGGGTCCTGTTGGTGTTGGAGATACCGCAAGAAGCATAAATATTCATATACATGCTGGGACCTCGCTTGCCCCCGGTGTGTTATCAGTTGGTTCAAGGGCAAATACTGGAGAAGCCACTCATGGAGAACAACCTAATGGAACTCGTTCAGGTGATTCAGGTCCAATGCGAATGCTGCCTGTAAGAAATGTCATTGCTGCAGCTGTTCCATCACATTCCCCTGCAGAGGCAGCTAGTCGTGTTCTAAATGTTCTCCACCCTCTTCATGCAAGATTGCAGCAGACCAATCATAGCTCTTCAGCTCCTGCACAAGGTTCTGGTGTGGCGGTATCCAGCACAGCACAAGCCAGTGAGGGTATTTCTATTCCACAGCCACATTCTGAATCTGCTTCCATCCCCACGTTTGTAGCCGAAATCAATTCTCAGCTTAGAAATCTTGTTGATAATATGCGAGGAGAAAATCAGCTTCCATCAGGCCAATTGGAGGGTTCTACTCTTCAGGGTTTGTCCATTGGATCTGGCACGGGTGATGATGTAGGGAATCATCAGCAGGAAAGCATGGCAGTTGATGGAGCTGGCGAGACCAGTGGATTGTTACCTGGTGGTGTTTCTGAAAGGGAAGGGCAGCAGCACCAGCCTGAATGCCGCCAATTTAGTAATAGTGAGGAAACAAGTGGTAGACTGAGTTCAAAAGAAGCATCATCAACTAGCTCACTGGGAGGCTCTTCAAGCTTCCCAAGTGGGGAAACAGCACTTTCCTGCAAATCAGAAGTTTCTGCAGAGGATGCTCCAAGATCCAGCAAGAGACATGACCCCCCTGGGGGAGACAAAACTGTTCCCTTGGGTTTAGGGCATGGAGGTCTGCAACCTAGGAGGCGAAGTAAGCTGGCGAGGTCTCAGGAGAAGAATGATGGTGGAACAAGCAGTGCCCCTCCTGTCAATCAGAATCAACAATCCATTGCTAGTGGCCAACAGATTATGGAGAATATGCCATTGGGAGCGCAAGCTTCCAATGGCCAGTTTGATGTATCAAGCATGGTGTCTCAAGTTCTCAACAGCCCTGCTTTGAATGGTCTATTGGCCGGAGTGTCGGAGCAAGCAGGGATTGGTTCCCCTGATGGCTTGAGAAACATGCTGGAGCAGTTCACACGGAGCCCTTCAACGAGGAGTACACTCAATCAGATTGCCGAACAGATGGATGGCCAAAATCTCGGCAATATTTTTTCTGGGATGGGGAGGGGCCAAGGCGGTGGCATGGATTTGTCAAGGATGGTTCAACAAATGATGCCCATTGTATCCGAAGCACTTACAAGGGGGTCGACCCGTCCTGAACCTTCCCGTGGTGTGCAACCCAAACCCCAGCGACAGTGTAATGAGAGTTTGCCTGTCAGATGTGACAAACCAGATGATGAAAATTCTCAGATTGATCTTCAGCAAGCTGCCTGGAGGGTTGAACGCCGTGATCCACCCAGAGATATTTTTCGCACTGTGATTGAAAACGCTGTTCATTTGTATGGTGACAGAATTGGTTCTGAAGATCTTGTTGAAGAATTGTGCAGCAATGAGGATCTTGCCAAGGTACATACTTCCTATTTTTCTGATATTCTACTGGTGGCATTAGGTACTGCACTGTTTCCCGTCATTTGGTTCAAAACACGCCTTAAGCAGCACATCATAAACGGATTGACCGTGATAATTGCAATTCAGTACCTGATACGATGCCTTTGCCAGTTTGCCTATTTTCTGGTCATTGAGCTCTTAAGCACATATAATCTTTTGCCTTGGCAGCAATTCATGGAGATGCTACACCGTAACATACATCGACGACTCCAAGCGGATTCTGAGTCCCCAGACAAGTCCTAA 3138 0.4783 MADENSLEGASTSEFTSVSSELSIEVNVKTLDSQIYTFRVDKNMPVPLFKEKIENVIGVPVGQQRLIFRGKVLKDDHLLSEYHVEDGNTLHLVARQPVQSQPSTGTSSGETIGNNDNRGNAASAGAPQHNRIGQVSHSVVLGSFNIGDQGEGIVPDFTQIIGAVLNSIGIGNQTSTGGASNILSSIASNASSQASQGVATEGTRGNVGGMSQTGNQVQPGQQFPLHPFQSLPQSLQFPLPGAAVAVPSHQMPIPDSLNTLSEFINRMELALSHNGYQPSPSPTNVGDPPRVEPSNARGLPTPEALSIVMRQAQQLLSRHAVDALSHIAGRLEGEGGSTDPAVRSQIQTESVQVGLAMQHLGALLLELGRTILTLRMGQSPAESLVNAGPAVYISPSGPNPMMVQPFALQTRSLFGGLAAQANPGNLGPVGVGDTARSINIHIHAGTSLAPGVLSVGSRANTGEATHGEQPNGTRSGDSGPMRMLPVRNVIAAAVPSHSPAEAASRVLNVLHPLHARLQQTNHSSSAPAQGSGVAVSSTAQASEGISIPQPHSESASIPTFVAEINSQLRNLVDNMRGENQLPSGQLEGSTLQGLSIGSGTGDDVGNHQQESMAVDGAGETSGLLPGGVSEREGQQHQPECRQFSNSEETSGRLSSKEASSTSSLGGSSSFPSGETALSCKSEVSAEDAPRSSKRHDPPGGDKTVPLGLGHGGLQPRRRSKLARSQEKNDGGTSSAPPVNQNQQSIASGQQIMENMPLGAQASNGQFDVSSMVSQVLNSPALNGLLAGVSEQAGIGSPDGLRNMLEQFTRSPSTRSTLNQIAEQMDGQNLGNIFSGMGRGQGGGMDLSRMVQQMMPIVSEALTRGSTRPEPSRGVQPKPQRQCNESLPVRCDKPDDENSQIDLQQAAWRVERRDPPRDIFRTVIENAVHLYGDRIGSEDLVEELCSNEDLAKVHTSYFSDILLVALGTALFPVIWFKTRLKQHIINGLTVIIAIQYLIRCLCQFAYFLVIELLSTYNLLPWQQFMEMLHRNIHRRLQADSESPDKS* 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00738 1045 MobiDBLite consensus disorder prediction 274 295 - -
Eupl13g00738 1045 MobiDBLite consensus disorder prediction 458 476 - -
Eupl13g00738 1045 MobiDBLite consensus disorder prediction 94 128 - -
Eupl13g00738 1045 Gene3D - 15 111 - -
Eupl13g00738 1045 MobiDBLite consensus disorder prediction 453 482 - -
Eupl13g00738 1045 MobiDBLite consensus disorder prediction 686 700 - -
Eupl13g00738 1045 MobiDBLite consensus disorder prediction 861 897 - -
Eupl13g00738 1045 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 9 951 - -
Eupl13g00738 1045 MobiDBLite consensus disorder prediction 520 554 - -
Eupl13g00738 1045 MobiDBLite consensus disorder prediction 577 607 - -
Eupl13g00738 1045 SMART ubq_7 24 95 IPR000626 GO:0005515
Eupl13g00738 1045 MobiDBLite consensus disorder prediction 638 679 - -
Eupl13g00738 1045 SUPERFAMILY Ubiquitin-like 20 96 IPR029071 -
Eupl13g00738 1045 ProSiteProfiles Ubiquitin domain profile. 24 97 IPR000626 GO:0005515
Eupl13g00738 1045 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Eupl13g00738 1045 PRINTS Ubiquitin signature 55 75 IPR019956 -
Eupl13g00738 1045 PRINTS Ubiquitin signature 76 97 IPR019956 -
Eupl13g00738 1045 PRINTS Ubiquitin signature 34 54 IPR019956 -
Eupl13g00738 1045 MobiDBLite consensus disorder prediction 726 741 - -
Eupl13g00738 1045 MobiDBLite consensus disorder prediction 577 741 - -
Eupl13g00738 1045 FunFam Large proline-rich protein BAG6 16 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00738 Eupl-Chr13 10830553 10846154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00738 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 40.278 1.37e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00738 - - ming:122073613 1085.48