Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00726 ATGACGATGGATGATAACGAGAGTTGCAGTAGCAGAACTATGGATTCATCGCCAACGCACCCTCGGCAGCAAAGACAGAAACTTGAGGTATACAACGAGGTTCTTCGTCGACTCAAGGATTCTGATAACGAAGAGGCGAATCTTCCTGGTTTCGACGATGAGCTCTGGGCTCATTTCAATCGACTCCCGACTAGATATGCGCTGGATGTGAATGTGGAGAGGGCAGAAGATGTTCTCACACACAAGAGATTACTGCAACTTGCACACGACCCTGCTAATAGACCTGCATTTGAAGTTCGCCTTGTGCAGGTTTCTCCTGTTTTTGATGGAAATTCAATTGATTTTATTCTTTCAAACTCTCCAAGAAAAGAAGATGCTCAAAGTTCTTCAAATTATCCTGGTAGACAAAGCATTCATCCACCACCTGCTTTTGGTTCATCGCCCAATCTCGAAGCCCTTGCACTTGAAGCCAACAAATCACATGTTCAAGATGAAGATAGCTCTGTGAATGCCAATCCACACTTTTCTCGGTCCATGCATGAGATCACTTTTTCAACAGATGACAAGCCAAAACTTCTCAGTCAGTTGACTTCATTACTTGCTGAGCTTGGTCTGAATATCCAAGAGGCGCATGCTTTTTCTACAGTGGATGGCTACTCCTTGGATGTCTTTGTTGTTGATGGTTGGCCACAAGAGGAAACCGAACAGCTTAGTCATGCCTTGGAAAAGGAAATTTTGAAGATTGAGAAGCAGTCTTGGTCGAAATCTCATTCCTTGTCTTCTACTGGCGAGCATGAGCAAACTGGGATTGAAGGCATTGAACCCATTCCTGATCATGTAAAAATACCTACTGATGGGACTGATGTCTGGGAAATTGATTCCAGGCTGTTGAAATTTGAAAACAAAGTTGCATCTGGATCATTTGGAGATCTGTACAAAGGTACCTACTGTAGCCAGGAAGTGGCTATTAAAGTCCTCAAGCCCGAGCGTGTAAATGCAGACATGCAGCAAGAGTTTGCTCAGGAAGTCTATATTATGAGGAAAGTTCGGCATAAGAATGTTGTACAATTTATTGGTGCATGTACCAGACCTCCAAGCTTATGCATTGTGACAGAATTTATGTCTGGTGGAAGTGTGTACGATTTTTTGCATAAGCAAAAAGGGGTATTTAAACTTCCATCTGTACTAAAGGTAGCAATCGATGTTTCCAAAGGAATGAACTACTTGCACCAAAATAATATAATCCACAGGGATCTGAAGGCTGCTAATCTTCTGATGGATGAAAATGATGTTGTTAAGGTTGCTGATTTTGGAGTTGCCAGGGTGCAAGCTCAGTCTGGAGTGATGACTGCGGAAACTGGAACATATCGTTGGATGGCTCCTGAGGTCATAGAGCACAAGCCGTATGATCACAAGGCTGATGTTTTCAGTTTCGGAATCGTGCTATGGGAGCTGCTAACGGGAAAGCTTCCCTATGAGTACTTAACCCCGTTACAAGCAGCAGTAGGCGTGGTCCAAAAGGGTCTTCGACCTACAATACCGAAGCACACTCATCCAAAGCTTACTGAACTGCTCGAGAGATGCTGGCAACAAGATCCAACTTTAAGGCCCGACTTCTCTGAAATTATAGAGATCTTGCAGCAAATAGCCAAGGAGGTTGGAGACGAGGGAGAGGATCGGCGCAAGGAGAAATCATCTGGCGGATTCCTTTCAGTTCTCAGACGGAGCCACCACTGA 1737 0.4427 MTMDDNESCSSRTMDSSPTHPRQQRQKLEVYNEVLRRLKDSDNEEANLPGFDDELWAHFNRLPTRYALDVNVERAEDVLTHKRLLQLAHDPANRPAFEVRLVQVSPVFDGNSIDFILSNSPRKEDAQSSSNYPGRQSIHPPPAFGSSPNLEALALEANKSHVQDEDSSVNANPHFSRSMHEITFSTDDKPKLLSQLTSLLAELGLNIQEAHAFSTVDGYSLDVFVVDGWPQEETEQLSHALEKEILKIEKQSWSKSHSLSSTGEHEQTGIEGIEPIPDHVKIPTDGTDVWEIDSRLLKFENKVASGSFGDLYKGTYCSQEVAIKVLKPERVNADMQQEFAQEVYIMRKVRHKNVVQFIGACTRPPSLCIVTEFMSGGSVYDFLHKQKGVFKLPSVLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENDVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKHTHPKLTELLERCWQQDPTLRPDFSEIIEILQQIAKEVGDEGEDRRKEKSSGGFLSVLRRSHH* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00726 578 MobiDBLite consensus disorder prediction 119 136 - -
Eupl13g00726 578 ProSiteProfiles ACT domain profile. 181 256 IPR002912 -
Eupl13g00726 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Eupl13g00726 578 ProSiteProfiles Protein kinase domain profile. 297 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00726 578 Coils Coil 231 251 - -
Eupl13g00726 578 SMART serkin_6 297 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00726 578 PRINTS Tyrosine kinase catalytic domain signature 517 539 IPR001245 GO:0004672|GO:0006468
Eupl13g00726 578 PRINTS Tyrosine kinase catalytic domain signature 454 464 IPR001245 GO:0004672|GO:0006468
Eupl13g00726 578 PRINTS Tyrosine kinase catalytic domain signature 371 384 IPR001245 GO:0004672|GO:0006468
Eupl13g00726 578 PRINTS Tyrosine kinase catalytic domain signature 473 495 IPR001245 GO:0004672|GO:0006468
Eupl13g00726 578 PRINTS Tyrosine kinase catalytic domain signature 408 426 IPR001245 GO:0004672|GO:0006468
Eupl13g00726 578 CDD ACT_TyrKc 179 246 - -
Eupl13g00726 578 Gene3D Transferase(Phosphotransferase) domain 1 376 569 - -
Eupl13g00726 578 FunFam serine/threonine-protein kinase HT1 376 567 - -
Eupl13g00726 578 SUPERFAMILY ACT-like 178 244 IPR045865 -
Eupl13g00726 578 Gene3D Phosphorylase Kinase; domain 1 287 375 - -
Eupl13g00726 578 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 139 554 - -
Eupl13g00726 578 Pfam Protein tyrosine and serine/threonine kinase 297 546 IPR001245 GO:0004672|GO:0006468
Eupl13g00726 578 MobiDBLite consensus disorder prediction 1 29 - -
Eupl13g00726 578 Pfam ACT domain 181 227 IPR002912 -
Eupl13g00726 578 CDD STKc_MAP3K-like 303 546 - -
Eupl13g00726 578 SUPERFAMILY Protein kinase-like (PK-like) 283 546 IPR011009 -
Eupl13g00726 578 MobiDBLite consensus disorder prediction 256 280 - -
Eupl13g00726 578 MobiDBLite consensus disorder prediction 119 148 - -
Eupl13g00726 578 MobiDBLite consensus disorder prediction 554 568 - -
Eupl13g00726 578 Gene3D - 179 254 - -
Eupl13g00726 578 FunFam Serine/threonine-protein kinase isoform 1 287 375 - -
Eupl13g00726 578 MobiDBLite consensus disorder prediction 554 578 - -
Eupl13g00726 578 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00726 Eupl-Chr13 10616088 10641916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00726 7 577 MAP Kinase Kinase Kinase AT4G35780 71.379 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Eupl13g00726 PK_Tyr_Ser-Thr 4.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00726 - - msin:131237127 974.156