Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00698 ATGGGTCTCTGCTGCCCCAAAGCCCGTCAAATCCCAATCTCATATTCTTCAGAGGATTCCCCTCCTCGTCACTATCCACAACAAACCAAAAAAACCCAAGAACAAACCAAAAAAATCCAAGAACAGATGTACCCAACTCCCCCCAAACCAGCTTTTTCTTCAACAACACAATTAAAATCCCTCTCATCTTCACATATTGGACCAGTTCTAGGAAAGCCCTTATGTGATTTGAAGTCAATTTATATGCTTGATAGAGAATTGGGTAGGGGACAGTTTGGGATTACTTATCTTTGTACTGAGAAGGCAACAGGAGCAAAGTATGCCTGTAAGTCAATATCGAAACGGAAACTTGTGAATAAAAAGGATATCGAGGATGTTCAGAGAGAGGTCTCGATCCTCCAGCACCTTACAGGGCAGCCCAATATTGTGGAGTTCAAGGGAGCTTATGAGGATAGTGCGAGTGTGCATTTGGTGATGGAATTGTGTTCGGGAGGGGAGCTTTTCGATCGAATTACTAAGAAGGGGAGTTATTCGGAGCGGGCAGCGGCAGCGATATGTCGGCAAATTGTGAATGTGGTTCATGCGTGCCATTTCATGGGGGTGATGCATAGAGACTTGAAACCGGAGAATTTCTTGTTTGCGAATCCTGATGAGGAATCCCCTCTCAAGGCCACGGATTTCGGACAATCGGTCTTCATCGAGGACGGGAAACTGTACAGCGAGATTGCAGGAAGTGCTTATTATGTGGCCCCAGAGTTGTTGAACAAGAGCTATGGAAAGGAAATAGATGTCTGGAGTGCTGGTGTCATCTTATATATTCTTCTAAGTGGTGTACCTCCATTTTGGGCTGAGACAGAGAAAGGCATCTTTAGTGCTATCTTAGAGGGTCACATCGACTTCAAAAGCGCACCATGGCCTACTATATCCGATGCTGCTAAGGATCTCATCAGGAAGATGTTAAATCAGGACCCTCAGAAACGAATTACTGCTGTCCAAATCCTTGACCATCCATGGATCAAAGAAGACGGTGAAGCATCTGACAAGCTTATAGATAATGCCGTTCTAACTAGGATGAAGCAATTCAAAGCAATGAACAAGCTAAAGAAACTCGCACTGAAGGTAATAGCAGAAAATCTTTCAGAGGAAGAAATCAGGGGTTTACATCAATTGTTCAACAACATGGACACTGATCACAGTGGTACAATAACCATTGAAGAGCTGAACAGTGGACTGTCTAGACTGGGATCAAAGCTTACTGAGTCCGAAATCAAGCAGCTGATGGATGCAGCTGATGTTGACAGAAGCGGGAGTATAGATTACATTGAGTTCATCACTGCTACTATGCATCGACATAGACTAGAGAAAGAAGATAACTTGTACAAGGCCTTTCGGCACTTTGACAAGGACGAGAGTGGGTTTATCACAAGAGATGAACTGAAACATGCTATGACTGAATATGGAATGGGGGATGAAGTCACTATAGATGAAATCATTGAGGATGTGGACACTGATAAAGATGGTAATATCAATTATGAGGAGTTTGTAGCCATGATGAGGAAGGGGACTCAAATTTCTGATGGAAAACAAAGAGGACCCACTTGA 1602 0.4345 MGLCCPKARQIPISYSSEDSPPRHYPQQTKKTQEQTKKIQEQMYPTPPKPAFSSTTQLKSLSSSHIGPVLGKPLCDLKSIYMLDRELGRGQFGITYLCTEKATGAKYACKSISKRKLVNKKDIEDVQREVSILQHLTGQPNIVEFKGAYEDSASVHLVMELCSGGELFDRITKKGSYSERAAAAICRQIVNVVHACHFMGVMHRDLKPENFLFANPDEESPLKATDFGQSVFIEDGKLYSEIAGSAYYVAPELLNKSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFSAILEGHIDFKSAPWPTISDAAKDLIRKMLNQDPQKRITAVQILDHPWIKEDGEASDKLIDNAVLTRMKQFKAMNKLKKLALKVIAENLSEEEIRGLHQLFNNMDTDHSGTITIEELNSGLSRLGSKLTESEIKQLMDAADVDRSGSIDYIEFITATMHRHRLEKEDNLYKAFRHFDKDESGFITRDELKHAMTEYGMGDEVTIDEIIEDVDTDKDGNINYEEFVAMMRKGTQISDGKQRGPT* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00698 533 FunFam Calcium-dependent protein kinase 1 83 166 - -
Eupl13g00698 533 ProSitePatterns EF-hand calcium-binding domain. 431 443 IPR018247 -
Eupl13g00698 533 ProSitePatterns EF-hand calcium-binding domain. 502 514 IPR018247 -
Eupl13g00698 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Eupl13g00698 533 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Eupl13g00698 533 FunFam Calcium-dependent protein kinase 1 347 522 - -
Eupl13g00698 533 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 514 - -
Eupl13g00698 533 ProSiteProfiles EF-hand calcium-binding domain profile. 494 524 IPR002048 GO:0005509
Eupl13g00698 533 Gene3D - 349 523 - -
Eupl13g00698 533 FunFam Calcium-dependent protein kinase SK5 167 351 - -
Eupl13g00698 533 SMART efh_1 493 521 IPR002048 GO:0005509
Eupl13g00698 533 SMART efh_1 386 414 IPR002048 GO:0005509
Eupl13g00698 533 SMART efh_1 458 486 IPR002048 GO:0005509
Eupl13g00698 533 SMART efh_1 422 450 IPR002048 GO:0005509
Eupl13g00698 533 Gene3D Phosphorylase Kinase; domain 1 82 166 - -
Eupl13g00698 533 ProSitePatterns EF-hand calcium-binding domain. 395 407 IPR018247 -
Eupl13g00698 533 ProSiteProfiles EF-hand calcium-binding domain profile. 418 453 IPR002048 GO:0005509
Eupl13g00698 533 ProSiteProfiles EF-hand calcium-binding domain profile. 454 489 IPR002048 GO:0005509
Eupl13g00698 533 MobiDBLite consensus disorder prediction 13 29 - -
Eupl13g00698 533 SUPERFAMILY Protein kinase-like (PK-like) 81 340 IPR011009 -
Eupl13g00698 533 ProSiteProfiles Protein kinase domain profile. 81 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00698 533 SUPERFAMILY EF-hand 378 521 IPR011992 -
Eupl13g00698 533 CDD EFh 461 519 IPR002048 GO:0005509
Eupl13g00698 533 Gene3D Transferase(Phosphotransferase) domain 1 167 348 - -
Eupl13g00698 533 ProSiteProfiles EF-hand calcium-binding domain profile. 382 417 IPR002048 GO:0005509
Eupl13g00698 533 SMART serkin_6 81 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00698 533 ProSitePatterns EF-hand calcium-binding domain. 467 479 IPR018247 -
Eupl13g00698 533 Pfam EF-hand domain pair 387 447 IPR002048 GO:0005509
Eupl13g00698 533 Pfam EF-hand domain pair 457 519 IPR002048 GO:0005509
Eupl13g00698 533 CDD STKc_CAMK 81 338 - -
Eupl13g00698 533 Pfam Protein kinase domain 81 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00698 533 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00698 Eupl-Chr13 10292370 10298279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00698 9 522 EF-hand Containing Proteins AT3G20410 65.953 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl13g00698 Pkinase 2.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00698 K13412 - psom:113289012 792.727