Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00697 ATGGAGTTCTACGCCTACCCTTCTCCTTCTCCTTCTTCTTCTTTTTCTTCTTCATCTTTATCTTTTGGGATTTGGGTGGAAAGAGTTAGAGAGATTTGCATCTCTGTCGTTTCTGCAGTTCTGGGGAATCTTGTCTCTGCCATCTTCACCTTCTTTTTCGCAGTGGTCGGTTCTATGTTAGGAGCCATGACAGGAGCTCTGATAGGCCAAGAAACCGAGAGTGGGTTCTTCCGTGGGGCTGCAGTTGGAGCTATCTCAGGAGCTGTTTTCTCAATCGAGGTCTTCGAAGCTTCTCGCCTTCTATGGCAGTCCGACGACACGGGAATTGGGTGTCTCCTCTACTTGATTGATGTCATTGCAAGCCTTCTAAGCGGAAGACTAGTTCGGGAGCAAGTTGGTCCAGCGATGTTGAGTGCAGTACAGAGCCAGATGGGTGCCATTGAAATAAGCTTTGAAGAGGTTCCCGACATCTTTGCGACCGGTGGATCCAAAGGGTTGTCAGGAGATTCAGTTGAGAAGATCCCAAAGATCAAAATCACAACCAAGAACAATGTGGACGAGTCGGGGGAGAGGGTCTGTTGTTCAGTGTGCCTTCAGGACCTTCAGCTGGGGGAGACGGTTCGAAGCTTGCCACACTGTCACCACATGTATCATCTACCTTGTATCGATAAGTGGCTTGTCAAGCATGGTTCTTGTCCACTATGCAGAAGGGATCTGTAA 720 0.4861 MEFYAYPSPSPSSSFSSSSLSFGIWVERVREICISVVSAVLGNLVSAIFTFFFAVVGSMLGAMTGALIGQETESGFFRGAAVGAISGAVFSIEVFEASRLLWQSDDTGIGCLLYLIDVIASLLSGRLVREQVGPAMLSAVQSQMGAIEISFEEVPDIFATGGSKGLSGDSVEKIPKIKITTKNNVDESGERVCCSVCLQDLQLGETVRSLPHCHHMYHLPCIDKWLVKHGSCPLCRRDL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00697 239 FunFam NEP1-interacting protein-like 1 154 239 - -
Eupl13g00697 239 ProSiteProfiles Zinc finger RING-type profile. 194 236 IPR001841 -
Eupl13g00697 239 Pfam Ring finger domain 194 236 IPR001841 -
Eupl13g00697 239 SUPERFAMILY RING/U-box 177 239 - -
Eupl13g00697 239 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 27 238 IPR044523 -
Eupl13g00697 239 SMART ring_2 194 235 IPR001841 -
Eupl13g00697 239 CDD RING-H2_NIPL1-like 193 236 - -
Eupl13g00697 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 158 239 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00697 Eupl-Chr13 10282083 10283730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00697 26 239 C3H Transcription Factor Family AT5G66070 73.364 1.39e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00697 - - psom:113346744 377.096