Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00695 ATGGGTGTCCCACAAACCGACATGGAGGAGGGATCTCTGGAGATCGGGATGGAGTATAGAACTGTCTCTGGGGTTGCAGGACCACTGGTTATCTTAGAGAAAGTTAAGGGTCCCAAATATCAGGAGATTGTCAATATTCGTTTGGGAGATGGCACAATGCGACGTGGTCAAGTTCTAGAAGTTGATGGGGAGAAAGCTGTTGTGCAGGTTTTTGAAGGAACGTCGGGAATTGACAACAAATACACGACTGTGCAATTCACCGGAGAGGTTTTGAAAACTCCTGTCTCATTAGACATGCTCGGGCGCATTTTTAATGGATCAGGGAAACCCATCGATAATGGTCCCCCTATTCTTCCTGAGGCTTACTTGGATATTTCCGGAAGTTCAATCAACCCTAGTGAGAGAACCTATCCTGAAGAAATGATTCAGACAGGGATTTCGACAATTGATGTCATGAATTCCATTGCTCGAGGACAGAAGATCCCTCTTTTTTCTGCTGCTGGTCTTCCTCACAACGAAATAGCTGCACAGATCTGTCGTCAGGCCGGTCTCGTAAAGCGATTGGAGAAGACTGAAAATCTAATGGAGGATGGGGAAGAGGACAATTTTGCCATTGTATTTGCAGCTATGGGAGTAAACATGGAGACAGCACAGTTTTTCAAACGTGATTTTGAGGAAAATGGATCAATGGAGAGAGTGACCCTTTTTCTAAACCTGGCCAATGATCCTACCATTGAACGCATTATCACTCCTCGAATTGCTCTCACCACAGCAGAATATTTGGCTTATGAGTGTGGGAAGCATGTTCTGGTCATATTAACAGATATGAGCTCTTACGCAGATGCACTTCGAGAGGTCTCAGCTGCCCGAGAGGAAGTCCCAGGTAGACGTGGGTATCCTGGGTATATGTATACAGATCTGGCAACGATCTACGAGCGTGCTGGACGTATTGAAGGACGAAAAGGCTCCATCACACAAATTCCTATTTTAACTATGCCCAATGATGATATCACGCATCCCACTCCAGATCTTACAGGCTACATTACTGAGGGGCAGATATACATTGATAGGCAGCTCTACAATCGACAGATACACCCACCAATCAATGTCCTGCCATCACTCTCACGATTAATGAAGAGTGCTATTGGGGAGGGAATGACTCGTCGAGACCATGCTGATGTGTCCAACCAGCTATATGCAAATTATGCTATCGGGAAGGACGTGCAAGCCATGAAAGCCGTGGTGGGAGAAGAAGCACTTTCATCTGAGGACCTGCTCTACCTTGAGTTCCTAGACAAATTTGAGAGGAAGTTTGTTTCCCAAGGAGCCTATGACACCCGCAACATCTTTCAGTCACTTGATCTGGCATGGACGTTGCTTCGTATCTTCCCCCGTGAGCTTCTCCACCGTATACCAGCAAAGACCCTAGATGCATACTACAGTCGAGACGCAGCTAATTGA 1461 0.462 MGVPQTDMEEGSLEIGMEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTENLMEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQIHPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVSQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAYYSRDAAN* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00695 486 NCBIfam V-type ATPase subunit B 18 485 IPR005723 GO:0033180|GO:0046961|GO:1902600
Eupl13g00695 486 CDD V_A-ATPase_B 90 383 - -
Eupl13g00695 486 Hamap V-type ATP synthase beta chain [atpB]. 16 484 IPR022879 -
Eupl13g00695 486 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 6 484 IPR022879 -
Eupl13g00695 486 CDD ATP-synt_V_A-type_beta_C 385 479 - -
Eupl13g00695 486 PIRSF V-ATPsynth_beta/V-ATPase_B 10 486 IPR022879 -
Eupl13g00695 486 Pfam ATP synthase alpha/beta family, beta-barrel domain 22 88 IPR004100 GO:0046034|GO:1902600
Eupl13g00695 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 381 IPR027417 -
Eupl13g00695 486 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 145 375 IPR000194 GO:0005524
Eupl13g00695 486 ProSitePatterns ATP synthase alpha and beta subunits signature. 366 375 IPR020003 GO:0005524
Eupl13g00695 486 Gene3D - 27 486 - -
Eupl13g00695 486 CDD ATP-synt_V_A-type_beta_N 18 89 - -
Eupl13g00695 486 FunFam V-type proton ATPase subunit B, brain 27 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00695 Eupl-Chr13 10271162 10279477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00695 1 486 Primary Pumps ATPases(2) AT4G38510 95.277 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00695 K02147 - psom:113356940 941.028