Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00686 ATGAGCGAGCAGGAGAATTGCGTGCGCGTCACCCGCGCAGCGAAGAAGAGGGCCGCCGCTGCCATGACTCCAGAACAATCTCTGCAACTTCCAGCGACCAAGAAACGAGTTGTCTTGGGAGAGCTCACGCTCTTAACGAATGTTGTGGAGAATCAAACTTCGGATATTGGACCCCAGAAACCCAAGACCAGATCGAAGAGGAAGGGTAAAAAAACGGCGACGCCGAACATTGATGCGAATTCGGATGATCCCCAGATGTGTGTGCCTTATGCTTCCGATATATATGAGTATCTTCACTCTATGGAGATGGAAGAGAAGAGGAGGCCATCTCCTGATTACATTGAGAAAGTTCAGAAGGATGTTACGGTCACTATGCGAAGCATTCTGGTAGATTGGCTGGTTGAGGTTGCAGAGGAATACAAGCTCGTCTCCGACACCCTTTATCTCACTGTCTCCTACATCGATAGATTCCTCTCTTCAAATGCCCTCAACCGGCAAAAGCTCCAGCTTCTCGGTGTTTCTTGCATGCTTATTGCCTCAAAGTATGAAGAGATCAGTCCTCCTCATGTAGAAGATTTTTGTTACATTACGGATAATACTTACACCAAGGAAGAGCCTGGGGTGAATCCACAGCTGGTGAAGATGGAGACAGACATACTTAAATTTCTGCATTTTGAGATGGGCAACCCCACAATAAAGAATTTTCTCAGGAGGTTCACGAGGGGTGCTCAAGAAAATAGCAAATCTCCCAATTTGCAATTGGAGTTCTTGGGTTGCTACCTTGCAGAGCTAAGTTTATTGGATTATGCTTGTGTACGGTTTTTACCATCAATGGTTGCTGCTTCAGTAATATTTCTTTCCAAATTCACAATCCAACCAAAGATGCATCCCTGGAACTTAACTCTGCAGCGGTACTCGGGTTATAAACCATCTGAGTTGAGAGATTGTGTCCTTGCCATACATGACTTACAAATGAGTAGGAAAGGAGGCTCTTTGGTAGCAATAAGAGATAAATACAAGCAGCACAAGTTCAAATGTGTGGCAACATTGACTTCTCCCCCAGAGATCCCCACAATTTATTTTGAAGATGTTAAAAGATGA 1101 0.4478 MSEQENCVRVTRAAKKRAAAAMTPEQSLQLPATKKRVVLGELTLLTNVVENQTSDIGPQKPKTRSKRKGKKTATPNIDANSDDPQMCVPYASDIYEYLHSMEMEEKRRPSPDYIEKVQKDVTVTMRSILVDWLVEVAEEYKLVSDTLYLTVSYIDRFLSSNALNRQKLQLLGVSCMLIASKYEEISPPHVEDFCYITDNTYTKEEPGVNPQLVKMETDILKFLHFEMGNPTIKNFLRRFTRGAQENSKSPNLQLEFLGCYLAELSLLDYACVRFLPSMVAASVIFLSKFTIQPKMHPWNLTLQRYSGYKPSELRDCVLAIHDLQMSRKGGSLVAIRDKYKQHKFKCVATLTSPPEIPTIYFEDVKR* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00686 366 Pfam Cyclin, N-terminal domain 93 227 IPR006671 -
Eupl13g00686 366 PIRSF Cyclin_A_B_D_E 2 358 IPR046965 GO:0016538|GO:0044772
Eupl13g00686 366 MobiDBLite consensus disorder prediction 53 84 - -
Eupl13g00686 366 FunFam Cyclin A1 217 349 - -
Eupl13g00686 366 FunFam Mitotic cyclin 6 109 207 - -
Eupl13g00686 366 SUPERFAMILY Cyclin-like 230 355 IPR036915 -
Eupl13g00686 366 Pfam Cyclin, C-terminal domain 230 352 IPR004367 -
Eupl13g00686 366 Gene3D - 93 349 - -
Eupl13g00686 366 PANTHER CYCLINS 67 346 IPR039361 -
Eupl13g00686 366 CDD CYCLIN_AtCycA_like_rpt1 83 226 - -
Eupl13g00686 366 Gene3D - 109 228 - -
Eupl13g00686 366 SMART Cyclin_C_2 230 353 IPR004367 -
Eupl13g00686 366 ProSitePatterns Cyclins signature. 126 157 IPR006671 -
Eupl13g00686 366 SMART cyclin_7 234 322 IPR013763 -
Eupl13g00686 366 SMART cyclin_7 131 221 IPR013763 -
Eupl13g00686 366 SUPERFAMILY Cyclin-like 82 227 IPR036915 -
Eupl13g00686 366 CDD CYCLIN_AtCycA-like_rpt2 230 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00686 Eupl-Chr13 10118806 10121763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00686 1 364 Core Cell Cycle Gene Families AT1G47230 59.249 1.58e-155 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00686 K06627 - nnu:104611679 570.466