Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00684 ATGGTGATCTTTCAGAGGGAAGAAGAACCAACTGAGATGTTGACCAATAACTTTCATGCCGGGTCAAAAACCAGCGATGAAGATGACCAGGTAGTGAGTGAAGATAATTTGGAAGAGTGGTTGAATTTGAGCTTGGGTACGAACAAACCATTGACAGCCGGGGATTCTGATTCCCCATTGAAACCCACTTCCAACAAGGTCTTCTCATGCAACTTCTGCATGAGAAAGTTCTTCAGCTCACAAGCATTGGGAGGTCATCAGAATGCCCACAAGAGGGAGAGAGGAGCAGTCAGAAGGTATCACTCTCAAAGGATGATAACCATGATGGGTTTGCCCTTTAATGCTCCAATCAACCGATCAATGGGCGTCCGGCCCCACTCACTTGTGCACAAGCCAAGCAGAGGAGGGAATGATATGGTGGCACGGTTCAATGATGCCAATTCCGGGTTTGGAATGGCATGGACGCGCTTCACAGTTGAAGAAGCAATGGATATGATGTGGCCAGGAAGCTTTCATGTAGACCCACAACAGCCCAAGCAACCATCTGAGCCACTTAAGCTCGACTTGAATCTCCGACTCTGA 582 0.4794 MVIFQREEEPTEMLTNNFHAGSKTSDEDDQVVSEDNLEEWLNLSLGTNKPLTAGDSDSPLKPTSNKVFSCNFCMRKFFSSQALGGHQNAHKRERGAVRRYHSQRMITMMGLPFNAPINRSMGVRPHSLVHKPSRGGNDMVARFNDANSGFGMAWTRFTVEEAMDMMWPGSFHVDPQQPKQPSEPLKLDLNLRL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00684 193 PANTHER ZINC FINGER PROTEIN 4-LIKE 3 193 - -
Eupl13g00684 193 SUPERFAMILY beta-beta-alpha zinc fingers 63 94 IPR036236 -
Eupl13g00684 193 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
Eupl13g00684 193 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Eupl13g00684 193 Gene3D Classic Zinc Finger 56 109 - -
Eupl13g00684 193 MobiDBLite consensus disorder prediction 170 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00684 Eupl-Chr13 10092514 10093267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00684 63 133 C2H2 Transcription Factor Family AT5G10970 49.367 6.02e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00684 - - ming:122073010 251.136