Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00647 ATGGAATCAGAATCTGCCGATTCATCTTCTTCACCTCCTGGTAAAGCTCCTGATGTTCAACCTCCTGCTACTTCTGGACAAGATAGCTCTGCGCGTGATGCACCATCAATATTATCTGCATCTGGCATATCATCATGGGCCAGAGGTCTCAAAATTCCACAACCCTTGGCAGCAGCACAAGAGGACTCACAAACTGGAAATGCTGGGAAGTCGAGTTTTGCACGTTTTACTAGTGGGCTTGGATTGCGCTTGTCTCCAAAAGCTTCTGTGCCAGATGAGAGTGTTGAGGGCACCTCTACAGCTGCACAACCTGGTGTTCTTGGATCATTCACAAAAGGGTTAGTTGATTCATCCAGGAGCGCGGTGAAGGCTGTGCAGGTCAAGGCTCGGCACATTGTCTCCCAAAACAAACGAAGATACCAGGAAGGAGGATTTGATTTGGATATGACTTACATCACTGAGAACATTATTGCCATGGGGTTTCCTGCCGGTGATATGAGCTCTGGTTTTTTTGGATATGTTGAGGGGTTTTACCGAAACCACATGGAAGAAGTGATCAAGTTTTTTGAAACTCATCACAAGGGAAAATACAAAGTATACAATCTTTGTTCAGAGAGGCTGTATGATGCATCACTATTTGAGGGGAAGGTTGCTTGTTTCCCGTTTGATGACCATAATTGCCCCCCGATTCAACTCATAACATTGTTTTGTCAAAGTGCATACTCATGGTTGAAGGAGGACATAGAAAATGTGGTTGTCGTTCACTGTAAAGCCGGCATGGCGAGGACAGGGTTGATGATTTCTAGCCTTCTTCTATTCCTGAAGTTCTTCCCAACAGCTGAGGAGTCCATTGACTACTACAATCAGAAAAGATGCTTAGATGGGAAGGGGCTAGTTCTTCCAAGTCAGATTAGGTATGTCAAATATTTTGAGCGCATCTTAACATACTTCAATGGCGAAAATCAGTCTGGGCGTAGGTGCATGCTTAGGGGATTTCGACTTCACAGGTGCCCTTATTGGATTAGGCCCTCCATTACTGTCTCTGATCATAATGGTGTTCTCTTCTCTACAAAAAAACACCCAAGAACTAAGGATTTAATGCCAGAAGACTTTTGGTTTAGTGCACCAAAGAAGGGGATCATGGTCTTTGCTCTACCAGGGGAGCCTGGTCTGACAGAGTTGGCTGGCGACTTTAAAATCCATTTTCATGACCGCCAAGGAGATTTCTACTGTTGGTTGAATACAACCATGATGGAAAACAGAAAAGTTTTAAACACCGCCGATCTTGATGGATTTGATAAGAGGAAACTGCCTTCTCCAGGATTCCAGGTTGAGGTTGTGCTGATAGACTATGATGGTATTGTTCCAACAAGATCCATAACTGAAGCTGCCAGCAAGAAATTGGATGGAAACTCGGGCACTGGTCCTTCCACAGGTGATGGGGGTCCACCAACTCCCAACCCAGGTAAAGGCTCCGGAAGCAGCGATAAAGATGATGTTTTCTCAGACAGTGAGGCAGAAGAAATTGGGTCTTCAAAGAGCAGGCAAGCTCGAGCGGCTTCCAGTGCAGAACCAGCTACTACGGCCAGAAGTGAAGATTCCAAAACTAGCACCACGTCAAAGGAAATGGCGGCCGTAACACGTGGGACTGAACAAGTTTCACTGAGAAGTGAGGGACCCACACAGATCCCTGTTGCGAGCGAACCAAGAAGTGATGGAGGTGGTGGTGCTGCCTCAGGACTCGAGGTCCCCAAGTTGGACTCGGTAGGAGTAAGTGAGTTCAAGGCAATTGCTGCAGATGCTTCTGTTTTCTCTTTTGGTGATGAGGAAGACTCTGAAAGTGAGTGA 1848 0.4616 MESESADSSSSPPGKAPDVQPPATSGQDSSARDAPSILSASGISSWARGLKIPQPLAAAQEDSQTGNAGKSSFARFTSGLGLRLSPKASVPDESVEGTSTAAQPGVLGSFTKGLVDSSRSAVKAVQVKARHIVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPIQLITLFCQSAYSWLKEDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIDYYNQKRCLDGKGLVLPSQIRYVKYFERILTYFNGENQSGRRCMLRGFRLHRCPYWIRPSITVSDHNGVLFSTKKHPRTKDLMPEDFWFSAPKKGIMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMMENRKVLNTADLDGFDKRKLPSPGFQVEVVLIDYDGIVPTRSITEAASKKLDGNSGTGPSTGDGGPPTPNPGKGSGSSDKDDVFSDSEAEEIGSSKSRQARAASSAEPATTARSEDSKTSTTSKEMAAVTRGTEQVSLRSEGPTQIPVASEPRSDGGGGAASGLEVPKLDSVGVSEFKAIAADASVFSFGDEEDSESE* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00647 615 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 123 320 - -
Eupl13g00647 615 CDD PTP_PTEN 148 313 IPR045101 GO:0016791
Eupl13g00647 615 MobiDBLite consensus disorder prediction 514 561 - -
Eupl13g00647 615 ProSitePatterns Tyrosine specific protein phosphatases active site. 254 264 IPR016130 GO:0016311|GO:0016791
Eupl13g00647 615 MobiDBLite consensus disorder prediction 496 512 - -
Eupl13g00647 615 MobiDBLite consensus disorder prediction 464 480 - -
Eupl13g00647 615 ProSiteProfiles Phosphatase tensin-type domain profile. 138 317 IPR029023 -
Eupl13g00647 615 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 252 291 IPR000387 GO:0016311|GO:0016791
Eupl13g00647 615 MobiDBLite consensus disorder prediction 22 38 - -
Eupl13g00647 615 MobiDBLite consensus disorder prediction 463 582 - -
Eupl13g00647 615 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 115 557 - -
Eupl13g00647 615 ProSiteProfiles C2 tensin-type domain profile. 324 451 IPR014020 -
Eupl13g00647 615 SMART PTEN_C2_2 322 450 IPR014020 -
Eupl13g00647 615 MobiDBLite consensus disorder prediction 1 38 - -
Eupl13g00647 615 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 151 318 IPR029021 -
Eupl13g00647 615 Gene3D Protein tyrosine phosphatase superfamily 123 320 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00647 Eupl-Chr13 9497064 9515003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00647 23 615 Protein tyrosine phosphatase (PTP) family AT3G19420 68.491 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00647 K01110 - ming:122074464 958.362