Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00642 ATGGCGGTGGAGCTCATGATGGGTTACAGGAGCGATAGTTTTTCAGCAAAGATGGAGGAGAATGCAGTAGAAGAAGCCGCGTCTGCAGGACTTGAGAGCGTTGAGAAGCTTATAAGGTTGCTATCTCAACGGCAAGGACGGCCGCAGCAGTATCAGGCGTCGGCGAATCCAAAAGCAGCCATGGAAATTGAGATGGATTGTAGAGCCGTCGCGGATGTGGCCGTGACTAAGTTCAAGAAGGTGATTTCGTTACTGGATCGGACGAGAACGGGTCATGCTCGCTTCAGAAGGGCTCCTTTGGCTTCTCCCCAACGGCAGGCAGACGAGTCCTTGTCGGTTGCCCATCAGCAGAATGAGGAGAAGCAATTTTCTGGTTCTGGGTCTAGGGTTTATTGTCCGACTCCGATCCAACGGCTCCCACCTCTTCCTCATCATCAAAACCACCATCATCATGCTTCACTCGTGATGCCGAAGAACGGTCTTAGCGAGAGAAAGGAGTCTTCTACGACGATTAATTTCACGTCTTCTCCTCCGATTTCCGCTGCGAATTCTTTCATGTCGTCTTTGACAGGCGATACGGATAGTAAACAGCCTTCGTCTTCGTCTGCCTTTCAGATTACGAATCTATCGCAGGTTTCATCAGCCGGACGGCCGCCTTTGTCCTCTTCCTCGTTAAAGAGGAAGTGCAGCTCATCCGACGACGCGGCCGCCAAGTGCGGAGGAGGTTCTGGGCGGTGCCATTGCTCGAAGCGAAGGAAATCGAGGGTGAAGAGAGTGGTGAGAGTTCCAGCGATTAGCTTGAAGATGGCTGATATCCCACCAGACGATTTTTCATGGAGAAAATACGGACAGAAACCCATCAAAGGATCTCCTCATCCAAGGGGTTACTACAAGTGTAGCAGCGTGAGGGGTTGTCCTGCACGTAAACACGTTGAAAGAGCTTTAGATGATCCAGCGATGCTGATCGTCACCTACGAAGGAGAGCATAATCACTCCCACACAGTAACGGAAACAAGCGGTCTAATTCTCGAATCTTCTTAG 1041 0.5091 MAVELMMGYRSDSFSAKMEENAVEEAASAGLESVEKLIRLLSQRQGRPQQYQASANPKAAMEIEMDCRAVADVAVTKFKKVISLLDRTRTGHARFRRAPLASPQRQADESLSVAHQQNEEKQFSGSGSRVYCPTPIQRLPPLPHHQNHHHHASLVMPKNGLSERKESSTTINFTSSPPISAANSFMSSLTGDTDSKQPSSSSAFQITNLSQVSSAGRPPLSSSSLKRKCSSSDDAAAKCGGGSGRCHCSKRRKSRVKRVVRVPAISLKMADIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLIVTYEGEHNHSHTVTETSGLILESS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00642 346 MobiDBLite consensus disorder prediction 207 230 - -
Eupl13g00642 346 ProSiteProfiles WRKY domain profile. 268 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl13g00642 346 MobiDBLite consensus disorder prediction 105 131 - -
Eupl13g00642 346 SMART WRKY_cls 273 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl13g00642 346 Gene3D WRKY domain 245 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl13g00642 346 FunFam WRKY transcription factor 65 257 334 - -
Eupl13g00642 346 Pfam Plant zinc cluster domain 226 271 IPR018872 -
Eupl13g00642 346 MobiDBLite consensus disorder prediction 98 151 - -
Eupl13g00642 346 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 335 IPR044810 GO:0003700
Eupl13g00642 346 MobiDBLite consensus disorder prediction 207 244 - -
Eupl13g00642 346 Pfam WRKY DNA -binding domain 275 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl13g00642 346 SUPERFAMILY WRKY DNA-binding domain 270 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00642 Eupl-Chr13 9421821 9424052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00642 1 294 WRKY Transcription Factor Family AT4G24240 49.394 2.21e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl13g00642 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00642 - - nnu:104601709 501.13