Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00630 ATGGAAGGAGAGTGTTCGTCGAGCAGTACAGAGTCGCGCAAGGGAAAGCGGTCGCAGAGAGAGAAACCCTATAGGGGTATAAGGATGAGGAAGTGGGGCAAGTGGGTAGCTGAGATAAGAGAACCCAACAAGCGGTCCAGAATCTGGCTTGGTTCCTACTCCACTCCTGTCGCCGCTGCACGGGCCTACGACACAGCTGTCTTCTACCTAAGGGGTCCGTCAGCCCGTCTCAACTTCCCAGAATCCGTTGGTGAAGAGGACCAGCCCCATGACATGTCCGCAGCGTCGATAAGGAAGAAAGCTACGGAGGTTGGGGCCAGAGTTGACGCCCTTGAAACTGGCCTCCTCGCCTCCAGGTCTCCTAAGAACCCCGATTTGAACGAGAAACCACAGCCCGAAAGTTCAGACTACGACGACTGA 420 0.5571 MEGECSSSSTESRKGKRSQREKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPESVGEEDQPHDMSAASIRKKATEVGARVDALETGLLASRSPKNPDLNEKPQPESSDYDD* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00630 139 CDD AP2 24 82 IPR001471 GO:0003700|GO:0006355
Eupl13g00630 139 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 8 136 - -
Eupl13g00630 139 SUPERFAMILY DNA-binding domain 23 82 IPR016177 GO:0003677
Eupl13g00630 139 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Eupl13g00630 139 MobiDBLite consensus disorder prediction 80 139 - -
Eupl13g00630 139 FunFam Ethylene-responsive transcription factor 2 22 81 - -
Eupl13g00630 139 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Eupl13g00630 139 PRINTS Ethylene responsive element binding protein signature 62 82 IPR001471 GO:0003700|GO:0006355
Eupl13g00630 139 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Eupl13g00630 139 MobiDBLite consensus disorder prediction 83 106 - -
Eupl13g00630 139 Pfam AP2 domain 24 72 IPR001471 GO:0003700|GO:0006355
Eupl13g00630 139 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Eupl13g00630 139 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00630 Eupl-Chr13 9275439 9275858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00630 19 119 AP2-EREBP Transcription Factor Family AT5G67190 77.451 3.42e-52 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl13g00630 AP2 6.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00630 K09286 - ming:122075723 214.542