Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00628 ATGGGAAGCATGAAGGTGCATCAGCTCACACGTGGGTTCTGGGAGCACGAACCACCCTCACTGACACTCGGCTGCAAGCGTCTCCGTCCTCTTGCACCCAAGCTTACTAATGGTGATGGTGTCACTGCTCTCGATCTCAAGAGCTTCATCAAGGCTGATAGTGGCCCCAGGAAGGTTGGATGCACCGACGAAAAGCGAGACTCAGCTCAGGTGGAAGTGCACTCCGGTGGCACACGGTGGAACCCAACACAAGAGCAAATAAGCCTCCTGGAGACGCTCTATAGGGGTGGCATGCGTACTCCCAACGCACAACAAATCGAACAAATCACAACTCAGCTCGGGAAGTACGGGAAGATCGAAGGGAAGAACGTTTTCTATTGGTTCCAAAATCACAAAGCTCGTGAGAGACAGAAGCAGAAGCGCAATAGTCTGGGTCTCAGCCATTCTCCAAGAACTCCTGTTGCTAACAGTACTGTGACTAGCAGTCCGGATACTAGTGGGGAAGTACAAAGACTGGACGACAGCCATTACAAGAGAAAGTGCCGGAGCTGGGCGATTGAGTGCTTCGAAGAGGATAGCAGGTTTTGTGGAGAGGAGGGAGATAAGACTCTGGAGCTCTTCCCTTTACACCCGGAAGGCAGATGA 645 0.5225 MGSMKVHQLTRGFWEHEPPSLTLGCKRLRPLAPKLTNGDGVTALDLKSFIKADSGPRKVGCTDEKRDSAQVEVHSGGTRWNPTQEQISLLETLYRGGMRTPNAQQIEQITTQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHSPRTPVANSTVTSSPDTSGEVQRLDDSHYKRKCRSWAIECFEEDSRFCGEEGDKTLELFPLHPEGR* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00628 214 ProSiteProfiles 'Homeobox' domain profile. 73 138 IPR001356 GO:0003677
Eupl13g00628 214 SUPERFAMILY Homeodomain-like 75 144 IPR009057 -
Eupl13g00628 214 Gene3D - 77 144 - -
Eupl13g00628 214 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 214 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Eupl13g00628 214 SMART HOX_1 75 142 IPR001356 GO:0003677
Eupl13g00628 214 FunFam WUSCHEL-related homeobox 4 77 144 - -
Eupl13g00628 214 MobiDBLite consensus disorder prediction 143 168 - -
Eupl13g00628 214 MobiDBLite consensus disorder prediction 135 171 - -
Eupl13g00628 214 Pfam Homeodomain 78 137 IPR001356 GO:0003677
Eupl13g00628 214 CDD homeodomain 78 139 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00628 Eupl-Chr13 9238769 9240137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00628 4 169 Wox Gene Family AT1G46480 57.754 9.94e-59 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Eupl13g00628 Homeodomain 1.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00628 - - vvi:100250666 338.961