Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00622 ATGATTCACAACAGACTCTCCTTCGCTGAATCAAACCTAATGTTACTCTCAATGTCATCTTCACCAAGTAGATCACCAGACCCCTCTAAGTCCAAGCTCCCCCAGATGCTGGGAGGACAAGAAGCAAGTCAAGGTTCTGAGGACGTTATCTCGGTTATTGATTCTCTAAAGAAACACGTTTCTGCCAACCGATGTGTTTTTATAAAGAAAAGAATAGAAGAGAACAGGCAGAAGCTGATTGGTATCACAAGTCATGTTTATGATTTGTCAAAGTCGAGAAGAAATGGTACAATAAGTGATAATTATAAAACTGTAGATTTATTGACTAAGAGGCAGCAGGATGTACTTTGTATGTTAAATGGTCCTGATCTAACTAACGGAGAAAAGGATAGCAATGGCTGCCAAGAAGATAGCCATGCCTCATCAGCAGTTCTTCTAGGGACTAGTTTTGGAGTAAAGAATATTGCTCGCTCTATCAAGCTTGCAGAAGTGAAAAAGTTACCTCCTTACACTTCATGGATGTTTTTGGATAGAAATCAAAGAATGACTGAGGATCAGTCGGTAGTTGGCCGAAGGAGAATATATTACGATCAAAATGGTGGAGAAGCTCTGATTTGCAGTGACAGTGAGGAAGAAGTAGTTGAAGATGAAGAAGAAAAGAAAGAATTTGGGGATTGTGAAGATTATATACTTCGAATGACCATCCAAGAAATTGGCTTATCTGATCCTGTGCTGGATTCATTGGCTCAATGTTTTTCTAGAAAATCTGGTGAAGTCAAGGCAAGATACGAAATTCATCTTAAAGGAGAGAAAGCTGCACAGTGCACTAAGAAAGGGAATACTGAAGATGGTCCACAAGTTGAGGATGCATTTGTTGATAAAGATCTGGATGCCGCTTTGGATTCTTTTGATAATCTATTTTGTCGACGGTGTCTGGTGTTTGATTGTAGATTACATGGATGTTCTCAGGATCTTGTTTTTCCTGCTGAGAAACAATCTCCGTGGAGCTATTCGGATGAGGAAAAAGTACCATGTGGCATTCATTGCTATCGATTGGTCCTGAAGTCAGAAAGTATTGCTATGATGAGCTCTCCGATGCCTGATGGTTTTGAAGAAAAACCAATTCCTTCATCTGGTAGTGCTGGGGGTCAGATATCGCCCAGAAAGAAAGCTGCTGGTTCATCTGTTGGAAGGAAACCCAAGTCTAATCAGAGTGAAAGTGCTTCTTCTAATGCAAGAAACATATCAGAAAGCACTGAGTCAGAGATAAGACCTCGACAGGATAGCACTCCTATTCGACACTCTTCATCAACCCCCAAGACTAAGCTTGTCGGAAAATTTGGAATTCGTAAGAGAAACAGCAAGCGAGTTGCTGAGCGTGTTCTTGTTTGCATGCGAAAGAGACAGAAGAAAATGGCGGCTTCTGATTCTGATTCAGTTGTCAGTGGGTGTCTTCGGCCAAGAGATATGAAGCTTAGATCGAATTCACGTAGGGAAAATGAAGATGCTAGCTCTTCTTCACACCAAAAAGTAAAATCTCCAGTATCAAGGAAGTCTAGGAAGAAGGAATCACCAGTTCAGGACAATAACAAATTGGTGTTGGGTGAAGTTCGTGATGAACCATCTAATGAGGTGATTACGGGCCCGCCACCACCGGTGACTGGTAGTCACGACACCTCAAGGAAAGAGGAGTTTGTTGATGAAAACATCTGTAAACATGAAGGTGATAAATCTTGGAAAGCTATTGAGAAGGGCTTGTATGCGAAAGGCATCGAGATCTTTGGAAGGAATAGCTGTCTAATCGCCAGGAACCTTTTGAATGGTATGAAGACATGTGCAGAGGTCTTTCATTACATGAGTTTCACCGAAAATAAGCTGTCCTATAGAGCAGGAGATGGTGCAAATTCTCTCTTTGAGGGCCATTCCAAGGTTGACTACAATGATACCATGGGTAGTGAACTACGAACAAGATCAAGGTTCATGCGTAGGAGGGGTAGGGTTCGTCGCTTGAAGTATACTTGGAAGTCTGCTGGTTACCATTCAATTAGGAAGCGAATTACTGAGAGGAAGGATCAGCCATGCCGGCAGTATAATCCCTGTAGTTGCCAGTCTGCTTGTGGAAAGCAGTGCACATGCCTTATAAATGGGACCTGTTGCGAAAAATATTGCGGGTGTCCTAAGAGTTGCAAGAATCGGTTTAGAGGCTGCCATTGCGCTAAAAGTCAATGTCGAAGTCGTCAGTGCCCATGCTTTGCTGCAGATAGAGAATGTGATCCAGATGTTTGTAGAAATTGCTGGGTTGGGTGCGGCGATGGTACGCTTGGAGGTCCTTCCCAAAGAGGTGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAACAACAAAGGGTCTTACTTGGAGGGTCCGATGTTTCGGGTTGGGGGGCTTTCCTAAAGAATAGCGTTGGCAAACATGAATACCTGGGGGAGTACACCGGGGAATTGATCTCACACCGAGAAGCTGATAAGCGTGGAAAGATCTACGACCGTGAAAATTCATCATTTCTCTTCAATTTGAATGATCAGTTTGTCCTCGATGCTTACCGGAAGGGTGATAAATTGAAGTTTGCAAACCATTCTCCCGATCCAAATTGCTATGCCAAGGTCATTATGGTAGCGGGTGACCACAGAGTGGGCATATTTGCTAAGGAACGGATAAGTGCAGGAGAGGAACTCTTTTACGATTACCGTTATGAACCAGACAGAGCTCCTGCTTGGGCAAGGAAGCCCGAAACTTCAGGTTCGAAAAAGGAAGAACTGGTCCCATCGAGTGGTCGTGCAAAGAAGCTTGCTTGA 2841 0.4308 MIHNRLSFAESNLMLLSMSSSPSRSPDPSKSKLPQMLGGQEASQGSEDVISVIDSLKKHVSANRCVFIKKRIEENRQKLIGITSHVYDLSKSRRNGTISDNYKTVDLLTKRQQDVLCMLNGPDLTNGEKDSNGCQEDSHASSAVLLGTSFGVKNIARSIKLAEVKKLPPYTSWMFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEVVEDEEEKKEFGDCEDYILRMTIQEIGLSDPVLDSLAQCFSRKSGEVKARYEIHLKGEKAAQCTKKGNTEDGPQVEDAFVDKDLDAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQSPWSYSDEEKVPCGIHCYRLVLKSESIAMMSSPMPDGFEEKPIPSSGSAGGQISPRKKAAGSSVGRKPKSNQSESASSNARNISESTESEIRPRQDSTPIRHSSSTPKTKLVGKFGIRKRNSKRVAERVLVCMRKRQKKMAASDSDSVVSGCLRPRDMKLRSNSRRENEDASSSSHQKVKSPVSRKSRKKESPVQDNNKLVLGEVRDEPSNEVITGPPPPVTGSHDTSRKEEFVDENICKHEGDKSWKAIEKGLYAKGIEIFGRNSCLIARNLLNGMKTCAEVFHYMSFTENKLSYRAGDGANSLFEGHSKVDYNDTMGSELRTRSRFMRRRGRVRRLKYTWKSAGYHSIRKRITERKDQPCRQYNPCSCQSACGKQCTCLINGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGGPSQRGDNYECRNMKLLLKQQQRVLLGGSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPETSGSKKEELVPSSGRAKKLA* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00622 946 Gene3D SET domain 697 914 IPR046341 -
Eupl13g00622 946 MobiDBLite consensus disorder prediction 518 538 - -
Eupl13g00622 946 Pfam SET domain 808 911 IPR001214 GO:0005515
Eupl13g00622 946 ProSiteProfiles SET domain profile. 797 912 IPR001214 GO:0005515
Eupl13g00622 946 SMART set_7 797 918 IPR001214 GO:0005515
Eupl13g00622 946 ProSiteProfiles CXC domain profile. 683 782 IPR026489 -
Eupl13g00622 946 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 41 944 IPR045318 GO:0006338|GO:0042054
Eupl13g00622 946 MobiDBLite consensus disorder prediction 467 564 - -
Eupl13g00622 946 Pfam CXC domain 735 766 IPR041355 -
Eupl13g00622 946 MobiDBLite consensus disorder prediction 18 44 - -
Eupl13g00622 946 FunFam Putative histone-lysine N-methyltransferase EZH2 697 914 - -
Eupl13g00622 946 Coils Coil 945 946 - -
Eupl13g00622 946 MobiDBLite consensus disorder prediction 397 418 - -
Eupl13g00622 946 SMART CXC_2 731 768 IPR033467 -
Eupl13g00622 946 MobiDBLite consensus disorder prediction 920 939 - -
Eupl13g00622 946 MobiDBLite consensus disorder prediction 920 946 - -
Eupl13g00622 946 MobiDBLite consensus disorder prediction 364 451 - -
Eupl13g00622 946 MobiDBLite consensus disorder prediction 490 506 - -
Eupl13g00622 946 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 17 946 IPR025778 GO:0031519
Eupl13g00622 946 CDD SET_EZH 797 913 - -
Eupl13g00622 946 SUPERFAMILY SET domain 679 917 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00622 Eupl-Chr13 9068803 9090618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00622 796 915 C2H2 Transcription Factor Family AT2G23740 28.082 2.96e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl13g00622 SET 5.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00622 - K11430 nnu:104606710 1480.69