Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00619 ATGGCGGCCGTGGAATCGGTGCAGTGTTTTGGGCGCAAGAAAACAGCAGTTGCAGTGACCCATTGCAAGCGCGGTAGGGGCCTGATCAAGATCAATGGGTCCCCTATCGAGCTCGTGGAACCGGAGATCCTCCGCTACAAGGCCTTCGAGCCGATCCTCCTTCTCGGTCGTCATCGCTTCGCCGGGGTTGACATGAGGATCAGGGTTCGCGGTGGAGGTCACACCTCGCAGATCTACGCCATCCGTCAGAGCATCGCCAAGGCTCTCGTGGCTTACTACCAGAAATATGTTGACGAGCAGTCCAAGAAGGAAATCAAGGACATCCTTGTCAGGTACGATCGGACCCTCCTCGTCGCTGATCCGAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGCGGAGCCCGTGCTCGTTTCCAGAAGTCTTACCGTTAA 432 0.5764 MAAVESVQCFGRKKTAVAVTHCKRGRGLIKINGSPIELVEPEILRYKAFEPILLLGRHRFAGVDMRIRVRGGGHTSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00619 143 Pfam Ribosomal protein S9/S16 11 143 IPR000754 GO:0003735|GO:0005840|GO:0006412
Eupl13g00619 143 PANTHER RIBOSOMAL PROTEIN S9 5 140 IPR000754 GO:0003735|GO:0005840|GO:0006412
Eupl13g00619 143 Gene3D - 2 143 IPR014721 -
Eupl13g00619 143 SUPERFAMILY Ribosomal protein S5 domain 2-like 6 143 IPR020568 -
Eupl13g00619 143 ProSitePatterns Ribosomal protein S9 signature. 71 89 IPR020574 GO:0003735|GO:0005840|GO:0006412
Eupl13g00619 143 FunFam 40S ribosomal protein S16 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00619 Eupl-Chr13 9028914 9029745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00619 3 143 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 90.071 9.38e-94 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00619 K02960 - nnu:104601738 280.026