Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00616 ATGATCGGAGTGAAGGAGAGCTCTCTCACTCTCCGTCTAATGGGCGATCTGAAGAAGGCGTCTGCGATCTCACTCCCACCCGGTTTTCGATTTCGTCCCTCTGAAGAACAACTCTTATCTTACTATCTCAGTGAGAAGAACAAGAATCAGAACCATAATCTCTCGAATCCTTCTCCTCATGATCCCCTCTATAGTTTCGACGTGATTCCAGAGATCGATTTGTACAACTATCACCCTTGCGATCTCCCTGAAACCGCCTGTTTTCTGTTCGGCCATGGCGGAAGTAAGAAGCATTGGTACTGTTTTACAGTGAAGGTAGCGACCAAGCGTTCGAAGCGGAAATCGGAAGGAGGGTTCTGGAAGACAAAGGGTCGGCCTCGTGATGTTGTGTGTGGAAATGAAGGAACGGTTTTGGGGACGAGGACGACTTTTGTGTTTTACAGTGGGAATTCTTCGTGCTTTAGCGAGACTGATTGGGTGATGAACGAGTATGCCCTCGTCGATTATCTCAAGGATTCTTTTGTCCTATGCCGAGTATTCAAATCTCATGACGGAAAAAAAAGATCAGAGAATGTCCCAAGTTCTTATGCCGAAGAAAATGATGCTACAACACTGGACATTTGTATGGATGCTCCTTATAAACAACACAATGGAGCCTCAACATCAGGCATTGGTGAAGTTGCAGTTCATGAGAACACCTTGGTTGACACAGACAATGAGATTCAGATGTTTCCGTTGACAGGTGCACCGGATGATCTTGTGGCTGGACCAGTTTCTGATGATGGGTTTGGGTCACCCCAGGGCATTCCACAACCTGATCAGCTGGTGAAACCCTCTGATGAATTTATGAGTGGTAGCGTCTTATTTGATTATGCTGTGGCTGATGAGTTAATAATCAATTCCTCAATCCTGGAGGGAGATTTCATAGAGTTAAACGATCTGGTATGCCCTCTTCCGGGCATTGATTCCTGA 972 0.4588 MIGVKESSLTLRLMGDLKKASAISLPPGFRFRPSEEQLLSYYLSEKNKNQNHNLSNPSPHDPLYSFDVIPEIDLYNYHPCDLPETACFLFGHGGSKKHWYCFTVKVATKRSKRKSEGGFWKTKGRPRDVVCGNEGTVLGTRTTFVFYSGNSSCFSETDWVMNEYALVDYLKDSFVLCRVFKSHDGKKRSENVPSSYAEENDATTLDICMDAPYKQHNGASTSGIGEVAVHENTLVDTDNEIQMFPLTGAPDDLVAGPVSDDGFGSPQGIPQPDQLVKPSDEFMSGSVLFDYAVADELIINSSILEGDFIELNDLVCPLPGIDS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00616 323 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 25 193 - -
Eupl13g00616 323 SUPERFAMILY NAC domain 21 182 IPR036093 GO:0003677|GO:0006355
Eupl13g00616 323 Gene3D NAC domain 34 186 IPR036093 GO:0003677|GO:0006355
Eupl13g00616 323 Pfam No apical meristem (NAM) protein 26 166 IPR003441 GO:0003677|GO:0006355
Eupl13g00616 323 ProSiteProfiles NAC domain profile. 25 182 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00616 Eupl-Chr13 9003676 9013345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00616 23 183 NAC Transcription Factor Family AT3G17730 37.209 8.52e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl13g00616 NAM 3.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00616 - - tss:122660833 321.627