Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00610 ATGTCTGAGTACAAGGCTGCGTTCATTAACGATCAGCTCTCCAAGAGAACCTCAATTTTTGGACTTCGTTTGTGGGTTGTTCTGGGTATCTGTGTTGGAGCTGCCTTTGTTCTTCTTCTCTTTCTCATTTCTCTTTGGTTCACCTCAAAACGCAACAACACTTCCAAACATAAGTCCTCTCAAAAACCCACAATCCCAACTGTGTCCAAAGAAATCCCAGAAATCAGAATCGACCATGTTCGAAACCCAACCCATCATCACCAGGATGCCAAGTCTCATCAGACCCAATTTCAGCCTAACCCTTTACCAGAATCGGATCTAATCGGTCTAACTGAGCGGCAAGCGCTGCTTTTCCATCCTGAGGAGGAGAGCCCAATTGGGCTTCATAGAATTCATATTGAAATCGGGAAGGATCATCGGATTTCGTATCCGGAACGTGGCGGTGGGTCTTTACATGGGAGCGGCGAGAATCGTTTGGTTGACCAGGTCGCAATAGCGGTTCCTGAGGTCTCTCATTTGGGTTGGGGGCATTGGTACACACTCAGAGAGCTTGAGGCTTCGACGAATGGGTTTGCTGACGAGAATGTAATCGGGGAAGGTGGATATGGGATTGTTTACCGTGGCGTTTTGGAGGACAACACCCAAGTTGCCATCAAGAATTTGCTCAATAACAGGGGACAAGCTGAGAGGGAGTTTAAGGTTGAAGTCGAAGCAATTGGTCGTGTTCGGCATAAGAATTTAGTGAGGTTGCTTGGCTATTGTGCGGAAGGAGCTCATAGGATGCTTGTTTACGAGTATGTAGACAATGGGAACTTAGAACAGTGGCTTCATGGGGATGTAGGTCCTTACAGTCCTCTTACATGGGAGATTCGTATGAACATTATCCTTGGAATGGCAAAAGGGTTGACATATCTTCATGAGGGGCTCGAACCCAAGGTCGTTCACCGTGATGTTAAATCAAGCAACATTTTGCTCGATGAGCAGTGGAACCCCAAGGTATCTGATTTCGGGCTTGCAAAACTATTGGGCTCAGAGAGTAGCTATGTCACAACCCGCGTGATGGGAACATTTGGGTTGGTTGAAATCTCTCTCTACATGATAACTACCTTCACTCTTTTAAGAAAATGTTGTCTGGCATCCATGGATGCAGTCCAAGCAGAGGGATTGATAACATTCTGTTTCTGGTTTTGTAGCTATGTAGCTCCTGAATATGCTAGTACAGGCATGTTGAATGAACGAAGTGATGTATATAGTTTTGGGATTCTTATTATGGAGATAATTTCTGGGAGAAACCCCGTCGATTACAGCCGACCTCCGGGAGAGGTTAACTTGGTTGACTGGCTCAAGACAATGGTTGCAAACCGGAATGCCGAGGGAGTGTTGGATCCTAAGATACCTGAGAAACCTTCTTCGAGGGCACTGAAGCGGGCCCTTTTAGTAGCTTTAAAATGCGTGGACCCAGATGCACAAAAGAGGCCGAAGATGGGGCATGTGATACATATGCTTGAAGTCGATGACCTCCCCTTCAGAGATATTCAGGATCGTCGAGCTGGGCGGGACCCAGGACGTGCACATCGTGAGGGTCCAAAGCGTGTGACTGAATCAGGTGATAGTAGTGGGTACGAAAGTGGCACAACAGCCAACAGGGTAAGCTAG 1656 0.4698 MSEYKAAFINDQLSKRTSIFGLRLWVVLGICVGAAFVLLLFLISLWFTSKRNNTSKHKSSQKPTIPTVSKEIPEIRIDHVRNPTHHHQDAKSHQTQFQPNPLPESDLIGLTERQALLFHPEEESPIGLHRIHIEIGKDHRISYPERGGGSLHGSGENRLVDQVAIAVPEVSHLGWGHWYTLRELEASTNGFADENVIGEGGYGIVYRGVLEDNTQVAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPYSPLTWEIRMNIILGMAKGLTYLHEGLEPKVVHRDVKSSNILLDEQWNPKVSDFGLAKLLGSESSYVTTRVMGTFGLVEISLYMITTFTLLRKCCLASMDAVQAEGLITFCFWFCSYVAPEYASTGMLNERSDVYSFGILIMEIISGRNPVDYSRPPGEVNLVDWLKTMVANRNAEGVLDPKIPEKPSSRALKRALLVALKCVDPDAQKRPKMGHVIHMLEVDDLPFRDIQDRRAGRDPGRAHREGPKRVTESGDSSGYESGTTANRVS* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00610 551 SUPERFAMILY Protein kinase-like (PK-like) 172 505 IPR011009 -
Eupl13g00610 551 MobiDBLite consensus disorder prediction 512 533 - -
Eupl13g00610 551 Coils Coil 211 231 - -
Eupl13g00610 551 MobiDBLite consensus disorder prediction 83 104 - -
Eupl13g00610 551 ProSitePatterns Protein kinases ATP-binding region signature. 197 219 IPR017441 GO:0005524
Eupl13g00610 551 FunFam Putative receptor-like serine/threonine-protein kinase 377 519 - -
Eupl13g00610 551 CDD STKc_IRAK 197 503 - -
Eupl13g00610 551 FunFam Probable serine/threonine-protein kinase At1g01540 171 266 - -
Eupl13g00610 551 FunFam Os07g0541700 protein 267 356 - -
Eupl13g00610 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Eupl13g00610 551 Pfam Protein tyrosine and serine/threonine kinase 396 502 IPR001245 GO:0004672|GO:0006468
Eupl13g00610 551 MobiDBLite consensus disorder prediction 512 551 - -
Eupl13g00610 551 MobiDBLite consensus disorder prediction 536 551 - -
Eupl13g00610 551 Gene3D Phosphorylase Kinase; domain 1 166 266 - -
Eupl13g00610 551 ProSiteProfiles Protein kinase domain profile. 191 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00610 551 Gene3D Transferase(Phosphotransferase) domain 1 267 511 - -
Eupl13g00610 551 SMART serkin_6 191 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00610 551 PANTHER OS01G0323000 PROTEIN 7 518 - -
Eupl13g00610 551 Pfam Protein kinase domain 192 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00610 Eupl-Chr13 8904081 8907572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00610 172 547 Receptor kinase-like Gene Family AT4G02010 38.501 9.14e-80 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Eupl13g00610 Pkinase 5.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00610 - - nnu:104601747 866.685