Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00608 ATGTTGGTTCACGGAGAGACGTTGCTGTTGGCTCTAACGGCGTTTCTTGGAATGCTGCAGATGGTAATGGCAACAGAATGTCCCCTGGATTTGAGTGGGTCAAATTTTACTTTGGTGGCATCTGTGTGTTCTAATCGAGTTGACAGAGGAAAATGTTGCCGTTACATCAATGCCTTTGTTGCAGTTTCTATTTCTCGCTATGCAAATACAACTAGCAACCTTGGGGTACCTTCAGAGTTATCTGAGATCTGCCTTCGTTCCATATCAGAAACCTTAGAATTTTATGGAATTTCACCGAATGCAAGCGTCTTCTGTGGACTTGGGACAAAAATTCCTGTTAATTATCAATGCAAGGGCCGAACAACTGTCATGCAGATGCTCCGGTCTCCAAAGTTTGAAGATGTCACAAAGAACTGCAAGATTCTGCTTTCAGTGGAAAGTAGTTGCAGGAGGTGCTTAAATGCTGGCATTGTATATCTTCACCACCTAATAGGAGCAGAAGATAATATAACCTTGAGTACTTGTCGGGATGCAACTTTTGCTGCTCTTGCAAGCCAGGGTGACAATGTGTTGGCCAATGACATGGCAAGCTGTTTCTTTGGGGTTCAAGGGCTTAGTATTCCTCCAGTGGTAACTTCAGAGCCATATCCACCTTCACTTGCTCCTGAGGCTACTCCAAGTCCATTGCCTGCTGCTAGCCCTAGACAGCTCCTAGTAGGTGTACCCTTTAAGGTGAATCACCATCCCTACCGCCTCACACTAATCCCAGCTGTTGGCATCGCAGTTACAGCCGTGGCTGTTCTGCTGCTGGTAATCTTGATACTTCTCATTCGTAGAAAAAGCAGAGAGCTAGAGGATTCACAGAATCCTGATGAGACCTCTTGGAAAACCTTCCCTTCTCGACCAATGCGGAAATGTCAGGAAGGTCCATCATCTATGTTCCGGAAGTTCAGCTACAAGGAAACAAAAAAGGCAACTGACAATTTCAATACCATCATAGGACGAGGGGGATTTGGAACTGTCTTCAAGGCTCACTTCAGTGATGGTTTTGTGGCAGCGGTGAAGCGGATGAACAAAGTCTCGGAGCAAGGGGAGGAGGAGTTCTGCCGAGAGATGGAACTTCTTGGAAGACTGCACCATCGTCATCTTGTTGCTCTAAGAGGCTTCTGTGTTGAAAAACATGAGAGGTTTCTGTTGTACGAGTACATGGCAAATGGAAGTTTAAAGGATCATCTTCACTCTCCAGGGAGAACTCCACTAAGTTGGCAGACTCGAATCCAAATTGCCATTGATGTGGCCAATGCTCTGGAGTACCTCCATTTCTATTGCGATCCCCCTCTCTGTCACAGAGACATAAAATCCAGCAACATTCTATTGGATGAGAACTTTGTTGCGAAGGTTGCAGACTTTGGCCTTGCACATGCTTCAAAAAGTGGTGCGATTAGCTTTGAACCAGTGAACACAGACATCCGGGGAACTCCAGGTTATATGGACCCTGAATATGTGGTGACTCAAGAGTTGACTGAGAAGAGTGATGTATACAGTTATGGTGTGCTGTTGTTGGAGCTAGTAACTGCAAGGAGAGCAATTCAAGACAGCAGGAATCTAGTGGAATGGTCCCAGATATACATGGCAACTGAGTCTAGGCTACCTGAACTAGTGGACCCTGCGATCAAGGACTCCTTCGATATAGAACAGCTTCAGACAGTCGTGACAATTGTGCGGTGGTGCACCCAGAGAGAAGGAAGGGCAAGGCCTTCAATTAAACAGGTTCTCAGGCTGCTGTATGAGAGTTCAGATCCAATGCACAGTGGCTTTGTACAGGCTGTCGAAGATGAAGATTATGAAGGCGCCGATGGTGGGGGAAGGACTAGTAAGGGGAAGGTGCAGAGGAGTGAGTTGATCTTCCACAGTGGGGACGCGAGGTGTCTTCCATCTTCTTCAAGTACATCTAGGTCCTACTGCAGCAGGAGCTTTTTACTTGAAACCGGATCACCACAATCTCCTCCTGGCATTTTTTCCGTTTGA 2028 0.4645 MLVHGETLLLALTAFLGMLQMVMATECPLDLSGSNFTLVASVCSNRVDRGKCCRYINAFVAVSISRYANTTSNLGVPSELSEICLRSISETLEFYGISPNASVFCGLGTKIPVNYQCKGRTTVMQMLRSPKFEDVTKNCKILLSVESSCRRCLNAGIVYLHHLIGAEDNITLSTCRDATFAALASQGDNVLANDMASCFFGVQGLSIPPVVTSEPYPPSLAPEATPSPLPAASPRQLLVGVPFKVNHHPYRLTLIPAVGIAVTAVAVLLLVILILLIRRKSRELEDSQNPDETSWKTFPSRPMRKCQEGPSSMFRKFSYKETKKATDNFNTIIGRGGFGTVFKAHFSDGFVAAVKRMNKVSEQGEEEFCREMELLGRLHHRHLVALRGFCVEKHERFLLYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKVADFGLAHASKSGAISFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVLLLELVTARRAIQDSRNLVEWSQIYMATESRLPELVDPAIKDSFDIEQLQTVVTIVRWCTQREGRARPSIKQVLRLLYESSDPMHSGFVQAVEDEDYEGADGGGRTSKGKVQRSELIFHSGDARCLPSSSSTSRSYCSRSFLLETGSPQSPPGIFSV* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00608 675 SUPERFAMILY Protein kinase-like (PK-like) 311 596 IPR011009 -
Eupl13g00608 675 Pfam Protein kinase domain 331 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00608 675 FunFam Putative receptor-like protein kinase 403 603 - -
Eupl13g00608 675 Gene3D Transferase(Phosphotransferase) domain 1 403 613 - -
Eupl13g00608 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Eupl13g00608 675 SMART serkin_6 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00608 675 CDD STKc_IRAK 333 595 - -
Eupl13g00608 675 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Eupl13g00608 675 Pfam SPARK 24 161 IPR043891 -
Eupl13g00608 675 FunFam Putative receptor-like protein kinase 296 402 - -
Eupl13g00608 675 MobiDBLite consensus disorder prediction 286 309 - -
Eupl13g00608 675 Gene3D Phosphorylase Kinase; domain 1 310 402 - -
Eupl13g00608 675 ProSiteProfiles Protein kinase domain profile. 327 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00608 675 PANTHER OS01G0750732 PROTEIN 213 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00608 Eupl-Chr13 8881573 8887519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00608 27 674 Receptor kinase-like Gene Family AT3G19300 63.134 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Eupl13g00608 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00608 - - ming:122063202 1058.51