LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl13g00606	ATGGCCACTCTCTCCTACTTGCTCTTCCACGTATTGCTTCTTATTACCCTCCACCTTGAATCCACTTCAGCAGATGGGTCCACCTATATAGTCCACATGGACAAATCTGTCATGCCCAAGGCTTTTGCTACTTATCACCATTGGTATGCTGCCACCATCGGTTCACTGAAGGTTGCTGGTACACGCACCTCGACGCCAAGGCTTCTGTATACTTATGACAATGCTATCCATGGTTTTAGTGCAGTCCTCTCTTTGGAAGAACTACAGACTCTACAGAAGTCGCTGGGCTTTGTCTCTGCTTACCCAGACAAGATCGTCAAGCTCGATACTACCCACACGTTGGAATTCCTTTCTCTCAATCCCGTCTCTGGCCTCTGGCCGGCATCAAATTATGGCAAAGATGTAATAATAGGCATGGTAGATAGTGGAGTCCGACCGGAGAGCGAGAGCTTCAAAGACGATGGGATGACTGAGGTCCCTGCAAGGTGGAAGGGAATTTGCCAGCCGGCATCATTTGCAGCCATGGAGAAGGGTGTATTTGTCTCCTTATCTGCCGGCAATGATGGACCATATCCCAAGTTGGTACAGAATGGAGCTCCCTGGGTATTAACTGTCGGTGCAAGCACCATTGATCGTCAATTCACTGCAACTTTGACACTGGGCGAAGGGTTAACCACCACAGGTTGGTCCTTGTTTCCTGCGAACGCATGGCTGGTGGACGTGCCACTCGTCTACAATGAGACTCTCCTGTCATGCAATTCATCTGAGTTGTTATCCGAAGCCAGCGATAAGATTGTTATATGTGAGGACAAATATGGGTATCTCCTAAAAAGCCAAATAGATCAGGTTGCTCAATCGAAAGTTGCCGGAGCTATATTTCTCTCCAATGATTCCCGATTCTTCGAAGTCGGGGACTTTAATTGTCCAGGAGTTGTGATTAACCCGATTCATGTTCCTATGGTGATCAGTTATGTGAAATCTACTGCTAATCCAATAGCAACCATGAAGTTCCAACAGACAACCTTGGGAACAAAGCCTGCGCCCACTGTTGCCTTCTACAGTTCAAGGGGACCTTTTATGAGCTATCCTACCATCCTGAAGCCGGATTTAGTTGCCCCGGGGTCAAGAGTGTTGGCAGCTTGGGTTCCAGATACACCAACCGCCATGATTGGATCCATGTACTTGTCGAGTGACTACAACATAGCTTCCGGGACATCCATGGCTTGTCCTCATGCAGCTGGAGTGGCTGCACTCTTGAAGGGTGCCCATCCTGACTGGACTCCCACTGCTATCCGGTCAGCCATGATGACCACAGCTAACCCATTAGATAATACTCTCGGTCCAATCCGAGACAATGGGAACAATTTGGAACCTGCCACTCCTCTAGCGATGGGAGCCGGTCAAGTCGACCCTAATAGGGCACTTGACCCGGGTCTTATTTATGACGCAGATGCCCAAGACTATGTGAATCACCTCTGCTTCATGAATTTCACTAGGGAGCAAATCTCAACGATCACGAGATCATCCAACTACAACTGCTCAAACCCGTCTTCTGATCTCAATTACCCATCTTTCATTGCTCTTTTCAATAACACATCATCAACTGTTCAAGAATTTCGAAGGACATCGACTAATGTTGGCGATGGGGCATCAACTTATACGGCCAAGTTGACGCTGCCGGAGGGCACATCGATCAGCTGTAACACCGGATACACTTGTTTTTCGAGAGAAGTATGA	1737	0.4807	MATLSYLLFHVLLLITLHLESTSADGSTYIVHMDKSVMPKAFATYHHWYAATIGSLKVAGTRTSTPRLLYTYDNAIHGFSAVLSLEELQTLQKSLGFVSAYPDKIVKLDTTHTLEFLSLNPVSGLWPASNYGKDVIIGMVDSGVRPESESFKDDGMTEVPARWKGICQPASFAAMEKGVFVSLSAGNDGPYPKLVQNGAPWVLTVGASTIDRQFTATLTLGEGLTTTGWSLFPANAWLVDVPLVYNETLLSCNSSELLSEASDKIVICEDKYGYLLKSQIDQVAQSKVAGAIFLSNDSRFFEVGDFNCPGVVINPIHVPMVISYVKSTANPIATMKFQQTTLGTKPAPTVAFYSSRGPFMSYPTILKPDLVAPGSRVLAAWVPDTPTAMIGSMYLSSDYNIASGTSMACPHAAGVAALLKGAHPDWTPTAIRSAMMTTANPLDNTLGPIRDNGNNLEPATPLAMGAGQVDPNRALDPGLIYDADAQDYVNHLCFMNFTREQISTITRSSNYNCSNPSSDLNYPSFIALFNNTSSTVQEFRRTSTNVGDGASTYTAKLTLPEGTSISCNTGYTCFSREV*	579

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl13g00606	578	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	15	109	IPR037045	-
	Eupl13g00606	578	ProSiteProfiles	Serine proteases, subtilase domain profile.	1	475	-	-
	Eupl13g00606	578	ProSitePatterns	Serine proteases, subtilase family, serine active site.	404	414	IPR023828	-
	Eupl13g00606	578	Pfam	Peptidase inhibitor I9	28	108	IPR010259	-
	Eupl13g00606	578	Gene3D	Peptidase S8/S53 domain	171	488	IPR036852	GO:0004252\|GO:0006508
	Eupl13g00606	578	Pfam	Subtilase family	160	453	IPR000209	GO:0006508\|GO:0008236
	Eupl13g00606	578	Gene3D	-	492	577	-	-
	Eupl13g00606	578	FunFam	Subtilisin-like protease SBT1.9	17	109	-	-
	Eupl13g00606	578	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	170	565	IPR045051	-
	Eupl13g00606	578	Gene3D	Peptidase S8/S53 domain	110	170	IPR036852	GO:0004252\|GO:0006508
	Eupl13g00606	578	Pfam	Fibronectin type-III domain	519	568	IPR041469	-
	Eupl13g00606	578	PRINTS	Subtilisin serine protease family (S8) signature	403	419	IPR015500	-
	Eupl13g00606	578	PRINTS	Subtilisin serine protease family (S8) signature	132	151	IPR015500	-
	Eupl13g00606	578	SUPERFAMILY	Subtilisin-like	108	479	IPR036852	GO:0004252\|GO:0006508
	Eupl13g00606	578	Gene3D	-	211	343	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl13g00606	Eupl-Chr13	8866072	8868189	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl13g00606	126	577	Subtilisin-like Serine Gene Family	AT5G67090	39.056	6.40e-93	299

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl13g00606	-		-	vvi:100243797	509.99