LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl13g00605	ATGAGGGTTGTTAACATGGCCACTCTCTCCTACTTGATCTTCCACGCATGGCTTCTCATTACCCTCCACCTTGAATACACATCAGCAGATAGGTCCACATATATAGTCCACATGGACAAATCTGTCATGCCCAAGGCTTTTGCTACTTATCACCACTGGTATTCTGCCACCATCCGTTCACTGAAGGTTGCTGGTCCACCCACCTCGACGCCAAGCCTTCTGTATACTTATGACAATGCTATCCATGGTTTTAGTGTAGTCCTCTCTGCGGAAGAACTACAGACTCTAGAGAAGTCGCCGGGCTTTGTCTCTGCTTACCCAGACAAGATCGTCAAGCTCGATACTACCCACACGTTGGAATTCCTTTCTCTCAATCCTGTCTCTGGCCTATGGCCGGCATCAAATTATGGCAAAGATGTAATAATTGGCATGATAGATAGCGGAGTCTGGCCGGAGACAATGGAGAAGGGTGTATTGGTCTCTTCATCCGCGGGAAATGATGGGCCAGATCCCATGACCTTACACAATGGAACTCCCTGGGTATTAACTGTTGGTGCAAGCACCATTGATCGTCAATTCACTGCAACTTTGATTCTGGGCGAAGGGTTAAGGACCACAGGTTGGTCCTTGTTTCCTGAGAATGCATGGCTGGTTGATATGCCACTGGTCTACAATGAGACTCTCTTACCATGCAATTCATCCGTGTTGTTATCAGAAGCCAGCAGCTATATGATTGTTATATGTGAGTACAAATATGGGTCTCTCGGAAACCAAATTAGTCAGGTTACTCAATCGAAAGTAGCCGGAGCTATATTTCTCTCCAATGAAACCCAATACATGGAAGTCGGGGACCTTCCTTGTCCAGGAGTTGTGATTGACCCGGATAGTGCTTCTCTACTGATCAGTTATGCGAAATCTACTCCTAATCCAGTAGCAACCATAAAGTTCCAACAGACAACTTTGGGAACAAAGCCTGCACCCACTGTTGCCTTCTACAGTTCAAGAGGACCTTCTATGAGCGCTCCAACCATCCTGAAGCCCGATTTAGTTGCCCCCGGCTCACTAGTGTTGGCAGCTTGGATTCCAAATACACCAACCGCCAAGATTGGATCCAATTTGTACTTGACAAGTGACTACAACTTAATTTCCGGGACATCCATGGCTTGTCCTCATGCATCTGGAGTAGCTGCACTCTTGAAGGGTGCACACCCTGATTGGACTCCCGCTGCTATCCGGTCAGCCATGATGACCACAGCTAACCCATTAGATAACTCCTTCAGTCCAATCCGAGACAATGGGGACAATTTGGAACCTGCCACTCCTCTAGCTATGGGAGCCGGTCAAGTCGACCCTAATAAGGCACTCGACCCGGGTCTTATTTATGATGCAGATGCACAAGACTATGTGAATTACCTCTGCTCCATGAATTTCACTATGGCCCAAATCTCCACGATCACAAGATCATCCAACTACGACTGCTCAATGTCGTCTTCTGATCTCAATTATCCGTCTTTCATTGCTCTATTCAAGAACACATCGTCAACTGTTCAAGATTTTCGAAGGACATCGACTAATGTTGGAGATGGTGCATCAACTTATAAGGCTAAGTTGATAGTGCCGGAGGGAACATTGATCAGTGTAACACCAGATACACTTGTTTTTCGGGAGAAGTATGAGAAGCTGAGCTTTACTGTATCTATAGACAGCCAACAGATGAAAGGGAACATCTCATATGGTTCTCTAGTTTGGGTTGACGATGGAGCTAAGCATACAGTGAGGAGCCCTATTGTGGTATATAGGATGATTTAG	1809	0.4621	MRVVNMATLSYLIFHAWLLITLHLEYTSADRSTYIVHMDKSVMPKAFATYHHWYSATIRSLKVAGPPTSTPSLLYTYDNAIHGFSVVLSAEELQTLEKSPGFVSAYPDKIVKLDTTHTLEFLSLNPVSGLWPASNYGKDVIIGMIDSGVWPETMEKGVLVSSSAGNDGPDPMTLHNGTPWVLTVGASTIDRQFTATLILGEGLRTTGWSLFPENAWLVDMPLVYNETLLPCNSSVLLSEASSYMIVICEYKYGSLGNQISQVTQSKVAGAIFLSNETQYMEVGDLPCPGVVIDPDSASLLISYAKSTPNPVATIKFQQTTLGTKPAPTVAFYSSRGPSMSAPTILKPDLVAPGSLVLAAWIPNTPTAKIGSNLYLTSDYNLISGTSMACPHASGVAALLKGAHPDWTPAAIRSAMMTTANPLDNSFSPIRDNGDNLEPATPLAMGAGQVDPNKALDPGLIYDADAQDYVNYLCSMNFTMAQISTITRSSNYDCSMSSSDLNYPSFIALFKNTSSTVQDFRRTSTNVGDGASTYKAKLIVPEGTLISVTPDTLVFREKYEKLSFTVSIDSQQMKGNISYGSLVWVDDGAKHTVRSPIVVYRMI*	603

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl13g00605	602	FunFam	Subtilisin-like protease SBT1.9	23	114	-	-
	Eupl13g00605	602	Gene3D	Peptidase S8/S53 domain	154	468	IPR036852	GO:0004252\|GO:0006508
	Eupl13g00605	602	ProSitePatterns	Serine proteases, subtilase family, serine active site.	384	394	IPR023828	-
	Eupl13g00605	602	Pfam	Subtilase family	153	444	IPR000209	GO:0006508\|GO:0008236
	Eupl13g00605	602	Pfam	Fibronectin type-III domain	499	598	IPR041469	-
	Eupl13g00605	602	Gene3D	-	190	322	-	-
	Eupl13g00605	602	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	21	114	IPR037045	-
	Eupl13g00605	602	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	34	152	IPR045051	-
	Eupl13g00605	602	PRINTS	Subtilisin serine protease family (S8) signature	383	399	IPR015500	-
	Eupl13g00605	602	PRINTS	Subtilisin serine protease family (S8) signature	137	156	IPR015500	-
	Eupl13g00605	602	Pfam	Peptidase inhibitor I9	33	113	IPR010259	-
	Eupl13g00605	602	Gene3D	-	472	601	-	-
	Eupl13g00605	602	ProSiteProfiles	Serine proteases, subtilase domain profile.	1	455	-	-
	Eupl13g00605	602	SUPERFAMILY	Subtilisin-like	154	459	IPR036852	GO:0004252\|GO:0006508
	Eupl13g00605	602	SUPERFAMILY	Subtilisin-like	3	152	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl13g00605	Eupl-Chr13	8856602	8858866	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl13g00605	156	601	Subtilisin-like Serine Gene Family	AT4G34980	40.938	6.31e-96	308

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl13g00605	-		-	msin:131235991	577.015