Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00597 ATGGTGGAATCGGTCGAAGATCTCTCTTCTGGCGAGCAATACCCTACATCTCTTACGGCGCTCTCTCAGCCAACAGGATCCCATGCCCACCTCGCTCAGGGAGGTCTTACTACACCCACAACTGTTACAGAGCAAGAGGCCCTGTTCATCCTTACACCAGAGGCTGTTCAAGAATCACTCGGTGCAGGAGATAGATCTTATTGTGGTCCATCTGGGTTTGTGTTTTTGTTTTTACATATATGGAGTTGTAATCGTTCGTTTGAAGATCTGATGATTAGATTTTGGTATGGAATGCAGGAGGAAATTAGGTTTGGTTTTGGTCGAGGAAGCCAGGAAGAGAAAGCAAGGAAAAAAGAAGAAAAGCCAAGAACAGCAAAGCTGAGAATCGAATCAATTGGGCTGATGGAGTGGGTAAGAGGGGAGATTGTCGGTAGGGGAAGCTTCAGTACTGTAAATCTCGCGATCCCAAGAAGAGATTGCAACAATATTCCTCCTTTGATAGCCGTGAAATCTTCTCTGTTTTCTCAATCATCTTTGCTTCAGAACGAGAAAGAGATCCTGAATCAACTCAGAGATTGTCCTCAAATTGTTCGATGCTTAGGCGACGATCTCACGATCGAAAACGGCCAAAAATTCTATAATGTTCTTCTCGAATTCGCCTCGAGAGGTAATCTAGCCCAGCTACTCATGAATTCAGGTGGTTCAATACCCGAATCCGATGTTCGATACTACACAAGATCGATTCTTCGAGGCCTTCATGACATCCATGATAAGGGCTTTGTTCACTGTGACATCAAGTTGCAGAACATCCTGGTATGCGCTTCTCCTGATGGATCCCACCAAGTCAAGATTGCCGATTTCGGGCTAGCGAAGAAGATCGGGCAGAAGAACAGTACAGAAGCTAATGGGGTGTTTGGTTTGAGGGGTACTCCTCTATACATGTCTCCAGAATTAGTTTCCCGTAACGAGCAAGAGGCACCGTCAGATGTGTGGGCCCTCGGGTGCGCCGTAGTGGAGATGATCACCGGGAAGCCTGCTTGGAGGTGTCGAGCTGAAGCTGATGTTAGTTGTTTATTGTTTCGGATTGGTTTTGGGGAGGAATTGCCGGAGATTCCTGCAGAATTGTCTGATCATGGGAAGGATTTCTTGAGGAGGTGCTTAGTGAGGGATCCTACAAAGAGATGGACGACTCAGATGCTGCTAGATCATCCTTTTGTTGCTGATGCCTCTGTTTCATTTCCTGAATCTGAAAAACCATCTCCATCTCCAAGAAGTGCTTTCGATTTCCCTGAATGGAGCTCCTCGCATTTGTCGATTTTGAATTCAGTTGATTCTTCTTCTTCGTTATGTTTTGAAAGAGAATTCAATGGGGCTGATCGAATTAGGTGGCTGGCAATGGGGCAGCAGCCCAATTGGTCCTCGTCAGATAGTTGGGTCACAGTAAGGCAAGCAGAGTAG 1458 0.4616 MVESVEDLSSGEQYPTSLTALSQPTGSHAHLAQGGLTTPTTVTEQEALFILTPEAVQESLGAGDRSYCGPSGFVFLFLHIWSCNRSFEDLMIRFWYGMQEEIRFGFGRGSQEEKARKKEEKPRTAKLRIESIGLMEWVRGEIVGRGSFSTVNLAIPRRDCNNIPPLIAVKSSLFSQSSLLQNEKEILNQLRDCPQIVRCLGDDLTIENGQKFYNVLLEFASRGNLAQLLMNSGGSIPESDVRYYTRSILRGLHDIHDKGFVHCDIKLQNILVCASPDGSHQVKIADFGLAKKIGQKNSTEANGVFGLRGTPLYMSPELVSRNEQEAPSDVWALGCAVVEMITGKPAWRCRAEADVSCLLFRIGFGEELPEIPAELSDHGKDFLRRCLVRDPTKRWTTQMLLDHPFVADASVSFPESEKPSPSPRSAFDFPEWSSSHLSILNSVDSSSSLCFEREFNGADRIRWLAMGQQPNWSSSDSWVTVRQAE* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00597 485 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 119 442 - -
Eupl13g00597 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Eupl13g00597 485 Pfam Protein kinase domain 139 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00597 485 Gene3D Transferase(Phosphotransferase) domain 1 134 455 - -
Eupl13g00597 485 CDD STKc_MAPKKK 136 406 - -
Eupl13g00597 485 ProSiteProfiles Protein kinase domain profile. 137 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00597 485 ProSitePatterns Protein kinases ATP-binding region signature. 143 170 IPR017441 GO:0005524
Eupl13g00597 485 MobiDBLite consensus disorder prediction 1 34 - -
Eupl13g00597 485 SUPERFAMILY Protein kinase-like (PK-like) 136 446 IPR011009 -
Eupl13g00597 485 SMART serkin_6 137 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00597 485 MobiDBLite consensus disorder prediction 9 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00597 Eupl-Chr13 8786958 8801306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00597 135 482 MAP Kinase Kinase Kinase AT3G50310 48.324 1.97e-107 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl13g00597 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00597 - - nnu:104606120 444.506