Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00595 ATGGCTCTTATGCTAGACAATTGCGAAGGTGTCTTGCTGACTTTGGACTCTCACAAATCTGTTCCAGCTCCTTTCCTTACCAAAACTTACCAACTCGTCGACGATCCCACCACCGACCACATCGTATCTTGGGGCGAAGACGACACTACCTTTGTCGTCTGGCGTCCCCCTGAATTCGCTCGCGATCTCCTTCCAAACTACTTCAAGCACAACAACTTCTCCAGCTTTGTCAGGCAGCTCAACACCTACGGTTTCAGGAAGATTGTCCCAGATAGGTGGGAGTTCGCGAATGAATTCTTCAAAAAGGGAGAGAAACATTTGTTGTGTGAGATTCATCGCAGAAAGACTTCTCAACCCCAACTCTCCATCAATCACCACCATCAATATCACCACCCTCATTCTCCGATTAGTGGTGGTGGGCAGGGTTTCTTTCCGTTCTCCGGCCGACTTAGCATATCGCCATCTGACTCAGACGAGCAACCCAATCGTTATGACTCGTCCCCACTATCGTCTCCAATAGGCGGTGGAGTCACAGCTGGAAGTGCCTGTAACAGCTCGATGTCAGCACTATCGGAGGATAACGAGAGACTCCGGCTGAGTAACTCCATGCTCATGTCGGAGCTCACACACATGAGAAAGCTCTATAACGATATAATCTACTTTGTTCAGAACCATGTGAAGCCTGTTGCTCCAAGTAATTCTTACCCTTCTTCGCTTGTGATCTGTAATAACCCATCTACACCAACTCCTTCCTTTACTTCTTCTAATACTGCAACGGTGCAAAAACCTCCTAATCAGCTTCTTGGGTTTTATCAGTCACAACCGAAACAAGTTCAGCATCCTAGTACCTCAACCAGCTCTCTAATGTTCCTCGAACAACCCAACAACAATAACGGTCGAACAAAACTGTTTGGGGTGCCTATTTATCCTAAGAAGAGATTGCACCCAGAACCCACATCTCCGACAACTAGGGAGACCAACAAGGCTCGGTTAATATTGGCTAAGGATGATTTAGGGCTGAATCTCATGCCGCCTTCTTCATGTTAG 1047 0.4718 MALMLDNCEGVLLTLDSHKSVPAPFLTKTYQLVDDPTTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTSQPQLSINHHHQYHHPHSPISGGGQGFFPFSGRLSISPSDSDEQPNRYDSSPLSSPIGGGVTAGSACNSSMSALSEDNERLRLSNSMLMSELTHMRKLYNDIIYFVQNHVKPVAPSNSYPSSLVICNNPSTPTPSFTSSNTATVQKPPNQLLGFYQSQPKQVQHPSTSTSSLMFLEQPNNNNGRTKLFGVPIYPKKRLHPEPTSPTTRETNKARLILAKDDLGLNLMPPSSC* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00595 348 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl13g00595 348 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl13g00595 348 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl13g00595 348 Gene3D - 17 116 IPR036388 -
Eupl13g00595 348 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl13g00595 348 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl13g00595 348 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl13g00595 348 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 287 IPR027725 -
Eupl13g00595 348 MobiDBLite consensus disorder prediction 154 177 - -
Eupl13g00595 348 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Eupl13g00595 348 FunFam Heat stress transcription factor B-4 17 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00595 Eupl-Chr13 8751376 8752756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00595 1 347 HSF AT1G46264 54.987 3.84e-113 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl13g00595 HSF_DNA-bind 3e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00595 K09419 - nnu:104606155 525.013