Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00582 ATGGAAGGTGGTGACGCTGGAGCGAAGCTCGGAGCTCTAAACTTTAAAGAAGATCGTAATGGTGGTGGACAATTGGGACTAGAGTCGTCGATTTTAGGTCCTGAAATCTCTGTTTCTTCGCCTGTAACTAGACAGAAAGCCGCTGCTGCTAAGCAGTTTATCGAGAATCATTACAAGAACCATCTGCAAGGCCTTCAGGATCGCAAAGAGAGACGTCGAGCGCTTCAAATGAAGGCACAAGAAGCTCAAATTTCAAATGAAGAACAACAAGTGATGCTGAGGAATTTGGAGCGCAAAGAGACTGAGTATATGAGATTGCAAAGGCATAAAATCGGAATTGATGACTTCGAGCAGTTATCATTAATAGGGAAAGGTGCATTTGGTGAGGTAAGGCTATGCCGTGCTAAAAGCACAGGAGAAATTTTTGCCATGAAGAAATTGAAGAAATCAGAGATGCTTAGTCGTGGACAGGTTGAGCATGTTAGATCTGAAAGGAACTTGCTTGCTGAGGTTGATAGCCGGTGTATTGTAAAACTTTTCTATTCATTCCAAGATTCTGATTTCTTGTACCTTATCATGGAGTATTTACCTGGTGGCGACTTTATGACTCTTTTGATGAGAGAGGATGTTCTTTCTGAAGATATTTCACGATTTTACATGGCAGAGAGCATTCTAGCTATTCATTCTATTCACCAGCATAATTATGTTCACAGAGACATAAAGCCGGATAACTTGTTACTGGACAAAAGTGGTCACGTGAAACTCTCGGACTTTGGCTTGTGCAAGCCTCTGGATTGTAAATATTCAACAATGTTATTGGAAAACGAAGTCTTCACCATTCAAGAATCAACAACAATTGAAACAGCAGAACATCCTGGGTGTGACAGAGCCCCTTGGCTGATGCCAAAAGAACAATTACAAAAATGGAAACGCAATCGTCGTGTATTGGCTTATTCTACCGTGGGAACTCTTGATTATATGGCACCTGAAGTGTTGCTGAAGAAAGGTTATGGAATGGAGTGTGACTGGTGGTCTTTGGGGGCAATCATGTATGAGATGCTTATAGGCTATCCTCCCTTTTGTTCGGACGATCCAAGGATCACTTGTCGGAAGATAATTAACTGGAAAACATGCTTGAAATTCCCCGAGGAACCAAAAATATCACATGATGCTAAGGATCTGATCTGTCATTTACTCTGTGATGTTGAAACAAGGCTGGGGACCAGAGGTGTGGAAGAAATAAAAGTACATCCATGGTTTAGCGGCATTGAATGGGACAAACTGTATGAGATGGAAGCTGCTTACAAGCCTGTTGTCAACGGAGAATTGGATACTCAAAATTTTGAGAAGTTTGAAGAAGTAGGAGGTCCACCATCAGCATTGCCAAGAGTGGGACCTTGGCGCAAGATGTTGACATCTAAAGATGCCAATTTCATAGGATACACTTTCAAGAAATCAGATGTGCTAAAATCTCTTGGAGCTTCAGGTACAGAAATGAGAAAGAAGGGTTCTTCAAAGACACCATCTCTTATATCCTTGTTTGGCCAAGTTGACCTGCAAGAAAGTGTAAATCCAGAAGGTGACCACAAATAG 1593 0.4168 MEGGDAGAKLGALNFKEDRNGGGQLGLESSILGPEISVSSPVTRQKAAAAKQFIENHYKNHLQGLQDRKERRRALQMKAQEAQISNEEQQVMLRNLERKETEYMRLQRHKIGIDDFEQLSLIGKGAFGEVRLCRAKSTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDSDFLYLIMEYLPGGDFMTLLMREDVLSEDISRFYMAESILAIHSIHQHNYVHRDIKPDNLLLDKSGHVKLSDFGLCKPLDCKYSTMLLENEVFTIQESTTIETAEHPGCDRAPWLMPKEQLQKWKRNRRVLAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIINWKTCLKFPEEPKISHDAKDLICHLLCDVETRLGTRGVEEIKVHPWFSGIEWDKLYEMEAAYKPVVNGELDTQNFEKFEEVGGPPSALPRVGPWRKMLTSKDANFIGYTFKKSDVLKSLGASGTEMRKKGSSKTPSLISLFGQVDLQESVNPEGDHK* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00582 530 Pfam Protein kinase C terminal domain 439 483 IPR017892 GO:0004674|GO:0005524|GO:0006468
Eupl13g00582 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Eupl13g00582 530 Pfam Protein kinase domain 116 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00582 530 FunFam Non-specific serine/threonine protein kinase 319 438 - -
Eupl13g00582 530 Gene3D Transferase(Phosphotransferase) domain 1 309 440 - -
Eupl13g00582 530 Gene3D Transferase(Phosphotransferase) domain 1 200 265 - -
Eupl13g00582 530 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 470 - -
Eupl13g00582 530 SUPERFAMILY Protein kinase-like (PK-like) 92 469 IPR011009 -
Eupl13g00582 530 SMART serkin_6 116 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00582 530 SMART pkinase_C_6 421 485 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl13g00582 530 ProSiteProfiles AGC-kinase C-terminal domain profile. 421 493 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl13g00582 530 Gene3D Phosphorylase Kinase; domain 1 89 199 - -
Eupl13g00582 530 Coils Coil 79 99 - -
Eupl13g00582 530 CDD MobB_NDR_LATS-like 50 111 - -
Eupl13g00582 530 CDD STKc_NDR_like 114 484 - -
Eupl13g00582 530 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Eupl13g00582 530 FunFam Non-specific serine/threonine protein kinase 200 267 - -
Eupl13g00582 530 ProSiteProfiles Protein kinase domain profile. 116 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00582 530 FunFam Non-specific serine/threonine protein kinase 87 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00582 Eupl-Chr13 8538016 8556399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00582 35 530 AGC Kinase Gene Family AT5G09890 76.258 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Eupl13g00582 Pkinase 4.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00582 K08790 - nnu:104601777 919.072