Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00574 ATGCGAAAATCCTCAAAAAGGCTTCGAGCAATCCAGCCGTCTCCTTCTTTACGTCCGACCCAAGAACAGGAGATGTCAATCATCGTTGCCGCTCTCAAGTATGTCCTTTACGGCGACACCGAAGGTGATGCCCTATCTTCAGCCGTCGATAGTGGCACCACATTTTCACCTGCAACTAGTAGCACCAGCATTGATCAAGGAACCATGATTTTGTCCCTTCCTGATGCTGACACGTGTAAAGTCTGTAAAATTGGCGGTTGTCTAGGGTGCAACTTTTTCGACTCATCTCAAGGAGAGAATAATATGAAGAAGATAAAGTACCGGGGTGTTCGACAGAGGCCATGGGGCAAATGGGTTGCTGAGATCAGGGACCCACGAATTCCAGCTCGGAAATGGCTCGGAACCTTCGATACCGCTGAAGAAGCCGCTCGAGCATACGATATGGAAGCCATTAACTGTCGTGGGTCCCGAGCGAAACTCAACTTCCCATTCCCTGACCCTAACAACTCACCTCATGAACAGCAATTACAACAGAATCAGCAGCAGAAGGAGGAGAAATTGAAAACAGAAGTAGAGAATCCACGCAGTAATGTCCCGATGGTGCATTTTGTCTCGCAGACGGAGACGGTGGTGGTGGCTGCAGAAAACAGTAGAGAAATGGAGAATTTCTACGACGTACTTGGACTTGGAAAGGACGAGCAGACCCAGGACTGGATATTCATGGACGCCTTGGGCGAATTACCAAGTTCTACTCCGGCTGAAACAACCGCGACCGTGTTTCCTTCTGAATTTGATTTGCCTCCCTAA 807 0.4882 MRKSSKRLRAIQPSPSLRPTQEQEMSIIVAALKYVLYGDTEGDALSSAVDSGTTFSPATSSTSIDQGTMILSLPDADTCKVCKIGGCLGCNFFDSSQGENNMKKIKYRGVRQRPWGKWVAEIRDPRIPARKWLGTFDTAEEAARAYDMEAINCRGSRAKLNFPFPDPNNSPHEQQLQQNQQQKEEKLKTEVENPRSNVPMVHFVSQTETVVVAAENSREMENFYDVLGLGKDEQTQDWIFMDALGELPSSTPAETTATVFPSEFDLPP* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00574 268 FunFam Ethylene-responsive transcription factor 2 106 164 - -
Eupl13g00574 268 PRINTS Ethylene responsive element binding protein signature 107 118 IPR001471 GO:0003700|GO:0006355
Eupl13g00574 268 PRINTS Ethylene responsive element binding protein signature 129 145 IPR001471 GO:0003700|GO:0006355
Eupl13g00574 268 Gene3D AP2/ERF domain 105 164 IPR036955 GO:0003700|GO:0006355
Eupl13g00574 268 SUPERFAMILY DNA-binding domain 106 164 IPR016177 GO:0003677
Eupl13g00574 268 Coils Coil 172 193 - -
Eupl13g00574 268 CDD AP2 106 163 IPR001471 GO:0003700|GO:0006355
Eupl13g00574 268 PANTHER DNA-BINDING DOMAIN 96 193 IPR044808 GO:0003700|GO:0009873
Eupl13g00574 268 SMART rav1_2 106 169 IPR001471 GO:0003700|GO:0006355
Eupl13g00574 268 ProSiteProfiles AP2/ERF domain profile. 106 163 IPR001471 GO:0003700|GO:0006355
Eupl13g00574 268 MobiDBLite consensus disorder prediction 167 182 - -
Eupl13g00574 268 MobiDBLite consensus disorder prediction 162 185 - -
Eupl13g00574 268 Pfam AP2 domain 106 152 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00574 Eupl-Chr13 8415914 8417007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00574 22 170 AP2-EREBP Transcription Factor Family AT4G34410 44.324 9.24e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl13g00574 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00574 - - nnu:104601789 201.83