Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00549 ATGTCCGCAAAGAATGAACATCATATGGTCCCGCTATCAGTGCTGCTGAAACGTGAGTTGGCAAATGAGAAGAATGAGAAACCAGAGATCCTACACGGACAGGCCAACCAGAGCAAAAAAGGGGAGGACTTCACGCTGTTGAAAACAGAATGTCAAAGGGTACCCGGGGATGGGGATACTACTTTTTCGGTTTTTGCGCTATTTGATGGACACAATGGAACTGCGGCTGCTATTTACTCAAAGGAGAATCTTCTGAACAATATTATTGGTGCTATTCCTTCTGATCTTAGTAGAGATGAATGGGTAGCAGCATTGCCAAGGGCTTTGGTTGCAGGATTTGTAAAAACAGATAAAGATTTTCAAGAGAATGCACAATCGTCAGGAACGACTGTCACCTTTGTTATAATAGATGGATGGGTCATAACTGTAGCATCAGTTGGTGATTCCCGTTGCATACTTGAATCTGCTGAAGGTGCTGTATATTCTTTGTCAGAAGATCATAGGCTGGAATGCAATGAAGAGGAGAGGGAACGTATAACGGCAAGTGGGGGTGAGGTTGGTCGGCTTAATACTGTTGGTGGTGCAGGGATTGGCCCTCTCAGATGCTGGCCAGGTGGCTTGTGTCTTTCAAGATCTATTGGAGATATGGACGTTGGAGAGTTCATCGTTCCTGTGCCCTATGTAAAGCAAGTGAAGCTGTCTGCTGCTGGAGGTAGGCTTATCATCTCAAGTGATGGTGTCTGGGATGCTTTGTCCTCAGAAATGGCTCTGAATTGTTGTCGCGGAATACCCGCAGATGCTGCAGCTGCTCAAATTGTTAAAGAGGCTTTACAGTTGAAGGGGCTTCGAGATGATACAACTTGCATTGTGGTGGATATATTACCACCAGAGAAGCTACCCTCTTCCATACCACCACCAAAGAAGCAGGGAAAAGGAGTTTTCAAGTCAATGTTCCGCAAAAAATCATCTGAGTCGTCTTCTCACTCGGAAAAAGAATATTTTGAGCCAGACGTGGTGGAGGAAATATTCGAGGAAGGATCTGCTATGCTTGCGGAAAGGCTAGATACGGATTATCCCCTGTGCAACATGTTCAAGCTGTTCATGTGTGCAGTTTGTCAGTTAGAGATGAAACCCGGAGAGGGAATTTCGGTGCATGCCGGTTCATCAAACCTGGGGAAATTGCGTCCCTGGGATGGCCCTTTCCTCTGTTCTAGCTGTCAATCGAAAAAAGAAGCGATGGAAGGGAAAAAACCACCAGGAGGTACAGCAGCTCTCATTTGCCTGATTATTTCAAACTCTTACATCACAAGCCTTGATTTTGCTCTTATTTTTGTTCTTTTCAGATGGTGCATCTAG 1356 0.4521 MSAKNEHHMVPLSVLLKRELANEKNEKPEILHGQANQSKKGEDFTLLKTECQRVPGDGDTTFSVFALFDGHNGTAAAIYSKENLLNNIIGAIPSDLSRDEWVAALPRALVAGFVKTDKDFQENAQSSGTTVTFVIIDGWVITVASVGDSRCILESAEGAVYSLSEDHRLECNEEERERITASGGEVGRLNTVGGAGIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSAAGGRLIISSDGVWDALSSEMALNCCRGIPADAAAAQIVKEALQLKGLRDDTTCIVVDILPPEKLPSSIPPPKKQGKGVFKSMFRKKSSESSSHSEKEYFEPDVVEEIFEEGSAMLAERLDTDYPLCNMFKLFMCAVCQLEMKPGEGISVHAGSSNLGKLRPWDGPFLCSSCQSKKEAMEGKKPPGGTAALICLIISNSYITSLDFALIFVLFRWCI* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00549 451 ProSiteProfiles PPM-type phosphatase domain profile. 43 293 IPR001932 -
Eupl13g00549 451 SMART PP2C_SIG_2 47 293 IPR001932 -
Eupl13g00549 451 Gene3D - 30 299 IPR036457 -
Eupl13g00549 451 SUPERFAMILY PP2C-like 36 293 IPR036457 -
Eupl13g00549 451 CDD PP2Cc 39 293 IPR001932 -
Eupl13g00549 451 FunFam probable protein phosphatase 2C 12 32 299 - -
Eupl13g00549 451 Pfam Protein phosphatase 2C 52 273 IPR001932 -
Eupl13g00549 451 PANTHER PROTEIN PHOSPHATASE 32 292 IPR015655 GO:0004722|GO:0006470
Eupl13g00549 451 SMART PP2C_4 21 291 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00549 Eupl-Chr13 8147182 8162077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00549 1 420 PP2C-type Phosphatase Gene Family AT1G47380 79.762 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00549 - - tcc:18591227 712.605