Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00539 ATGCTTCTGGCAGGCAAGAGCTCCATCCAGAGAACCCACTACGACATTCTATCCGTGAAGGAGGATGCAAGTTACGAAGTGATTCGCGCAAGCTACAGATCTGCTGTCCTTAATTCCCATCCTGATAAATTACAAGGGGTAACCGAAACGTGTGATCCTCACCATGAATCACAAGAAAGATTTCTGAAGGTACAGAAGGCTTGGCAGATTCTCAGTGACCCAAGCTCCCGTGCAATTTACGATAGTGAGCTGCAGGATTCAAGACGGGATACGGAAATTGCTGAAGATGTCAGCTTGGAGGAGATGATAGTGGAAGATGTTGGAGAGGTCTTGGAGCTGTTTTACCAGTGCAGGTGTGGCGATTACTTCTCTGTTGATTCTGCAGAATTAAAGGAAATGGGATATTCGTTGGAGAGGGGCGAGAGCAAGGTATTGCTACGGAGACCTGATGCTGTATCGGCATCTGTTCTTCTTCCTTGTGGGTCGTGCTCTTTGAAAATCCGTCTGATGATTGATGCAAATTGTTAG 528 0.4659 MLLAGKSSIQRTHYDILSVKEDASYEVIRASYRSAVLNSHPDKLQGVTETCDPHHESQERFLKVQKAWQILSDPSSRAIYDSELQDSRRDTEIAEDVSLEEMIVEDVGEVLELFYQCRCGDYFSVDSAELKEMGYSLERGESKVLLRRPDAVSASVLLPCGSCSLKIRLMIDANC* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00539 175 Pfam DnaJ domain 12 81 IPR001623 -
Eupl13g00539 175 Pfam CSL zinc finger 96 170 IPR007872 -
Eupl13g00539 175 ProSiteProfiles dnaJ domain profile. 12 84 IPR001623 -
Eupl13g00539 175 FunFam DNAJ heat shock N-terminal domain-containing protein-like 87 175 - -
Eupl13g00539 175 SUPERFAMILY CSL zinc finger 93 172 IPR036671 -
Eupl13g00539 175 SUPERFAMILY Chaperone J-domain 11 84 IPR036869 -
Eupl13g00539 175 Gene3D DPH Zinc finger 88 175 IPR036671 -
Eupl13g00539 175 Gene3D DnaJ domain 2 87 IPR036869 -
Eupl13g00539 175 SMART dnaj_3 11 76 IPR001623 -
Eupl13g00539 175 CDD DnaJ 12 73 IPR001623 -
Eupl13g00539 175 PRINTS DnaJ domain signature 56 76 IPR001623 -
Eupl13g00539 175 PRINTS DnaJ domain signature 14 32 IPR001623 -
Eupl13g00539 175 PRINTS DnaJ domain signature 32 47 IPR001623 -
Eupl13g00539 175 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 93 172 IPR007872 -
Eupl13g00539 175 PANTHER DPH3 HOMOLOG-RELATED 12 171 IPR044248 GO:0017183|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00539 Eupl-Chr13 8040546 8045821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00539 8 82 C2H2 Transcription Factor Family AT1G74250 39.744 1.47e-10 57.4