Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00517 ATGGGGCTCTGCAACTCGAAACCTTCCCCAAAACCAAATCCATACGCCCCTAGAGAAGTAGCGAAGGAAAACTCTACACCTTCTGCAACTCCTCTCAATGGAGGAACTGAGAATAATCATAATCATCATCATCAGCAGCAGCAACAGAAAGAACAGAAAGAGGAGGGGGAGGTTGGAAAGACGTCTCCTTTCTTCCCTTTTTACAGTCCGAGTCCCGCTCACTACTTGTTCTCGAAGAAATCTCCGGCTCCGAGTTCAAACTCTACACCTAGGAGGTTCTTTAAGAGACCTTTCCCACCACCATCGCCCGCCAAGCACATCCGGGCGGTGCTGGCAAGGCGGCATGGGTCGGTGAAGCCGAATGAGGCTGCTATACCGGAAGGGACTGAGTCTATGGTTGTTTCTGGTCTCGATAAGAGTTTTGGATTTCCGAAGCACTTTGCGAATAAGTATGAGCTTGGGGAGGGCGTAGGGCGTGGGCATTTTGGGTATACATGTGCCGCAAAGTTCAAGAAAGGGGAGCTCAAGGGCCAACAGGTTGCTGTCAAGGTCATCCCCAAAGCCAAGATGACTACAGCCATTGCCATTGAAGACGTGAGAAGGGAGGTGAAAATATTGAGGGCTTTGACAGGACATAACAATCTAGTGCAATTCTATGATGCATATGAAGACCACGACAATGTCTACATAGTAATGGAGTTATGTGAAGGGGGGGAGCTTTTAGATAGAATACTTTCAAGGGGAGGGAAATACACAGAAGATGATGCAAAGGCTGTCATGGTACAAATATTGAATGTTGTTGCATTTTGCCATCTCCAAGGTGTGGTGCACCGGGATCTTAAACCAGAGAATTTCCTGTTTACTTCAAAGGATGAAAATTCCCAATTGAAGGCCATAGACTTTGGCTTATCAGATTTTGTCAAACCAGATGAAAGGCTTAATGACATTGTAGGAAGTGCATACTATGTAGCACCTGAAGTTCTACATAGATCTTACAGTACGGAGGCTGATGTATGGAGTATTGGTGTGATAGCATACATTCTTCTATGTGGGAGTCGTCCATTTTGGGCCCGAACTGAATCTGGGATCTTCCGAGCAGTTCTAAAGGCTGATCCAAGTTTCGATGAACCACCTTGGCCTTCTCTATCTTTGGAGGCGAAGGATTTTGTCAAGCGCCTATTGAATAAAGATCCACGCAAAAGAATGACTGCTGCTCAGGCTCTAAGTCATCCTTGGATTAGAAATTACAATGATGTAAAAGTACCCCTGGATATTTTAATATTCAGACTCATGAGGGCATATATTCGTTCATCGTCTCTGCGTAAGGCTGCTTTGAGGGCTCTGTCTAAAACATTAACTGTGGATGAGCTTTTTTATCTGAAGGAGCAGTTTGCCCTATTGGAGCCAGACAAAAATGGCAGCATAAGCTTAGAAAATATCAGGATGGCTTTGATGAAAAATGCAACAGATGCAATGAAGGAGTCTCGTGTTCATGATTTTCTTGCCTCGCTGATTGCTCTTCAGTACAGAAGGATGGATTTTGAAGAATTCTGTGCAGCGGCATTAAGTGTCCATCAGCTTGAAGCACTCGATCGGTGGGAGCAACATGCTCGTTGTGCCTATGAACGTTTTGACGAGGATGGGAATAGAGCTATTGTCATTGAAGAACTTGCTTCGGAACTTGCGCTTAGCCCTTCTGTCCCAGTCCATGCTGTTCTTCATGACTGGATAAGGCACACTGACGGGAAGCTGAGCTTCCTTGGATTCATCAAATTGTTGCATGGTGTGTCCAGTCGGAACCTCACAAAGGCTCAATAA 1818 0.4543 MGLCNSKPSPKPNPYAPREVAKENSTPSATPLNGGTENNHNHHHQQQQQKEQKEEGEVGKTSPFFPFYSPSPAHYLFSKKSPAPSSNSTPRRFFKRPFPPPSPAKHIRAVLARRHGSVKPNEAAIPEGTESMVVSGLDKSFGFPKHFANKYELGEGVGRGHFGYTCAAKFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHNNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSQLKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSLEAKDFVKRLLNKDPRKRMTAAQALSHPWIRNYNDVKVPLDILIFRLMRAYIRSSSLRKAALRALSKTLTVDELFYLKEQFALLEPDKNGSISLENIRMALMKNATDAMKESRVHDFLASLIALQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYERFDEDGNRAIVIEELASELALSPSVPVHAVLHDWIRHTDGKLSFLGFIKLLHGVSSRNLTKAQ* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00517 605 Pfam Protein kinase domain 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00517 605 Gene3D Phosphorylase Kinase; domain 1 144 240 - -
Eupl13g00517 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Eupl13g00517 605 MobiDBLite consensus disorder prediction 76 104 - -
Eupl13g00517 605 SUPERFAMILY EF-hand 444 594 IPR011992 -
Eupl13g00517 605 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Eupl13g00517 605 SMART serkin_6 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00517 605 ProSitePatterns Protein kinases ATP-binding region signature. 157 183 IPR017441 GO:0005524
Eupl13g00517 605 FunFam CDPK-related kinase 1 144 239 - -
Eupl13g00517 605 CDD STKc_CAMK 150 412 - -
Eupl13g00517 605 ProSiteProfiles Protein kinase domain profile. 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00517 605 Gene3D - 438 592 - -
Eupl13g00517 605 FunFam CDPK-related kinase 1 449 522 - -
Eupl13g00517 605 SUPERFAMILY Protein kinase-like (PK-like) 148 442 IPR011009 -
Eupl13g00517 605 Gene3D Transferase(Phosphotransferase) domain 1 241 424 - -
Eupl13g00517 605 MobiDBLite consensus disorder prediction 43 58 - -
Eupl13g00517 605 MobiDBLite consensus disorder prediction 1 64 - -
Eupl13g00517 605 FunFam Calcium-dependent protein kinase SK5 323 418 - -
Eupl13g00517 605 Gene3D - 431 522 - -
Eupl13g00517 605 PANTHER SERINE/THREONINE-PROTEIN KINASE 136 580 - -
Eupl13g00517 605 FunFam CDPK-related kinase 3 143 315 - -
Eupl13g00517 605 MobiDBLite consensus disorder prediction 23 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00517 Eupl-Chr13 7597709 7618577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00517 1 601 EF-hand Containing Proteins AT3G50530 75.117 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl13g00517 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00517 K13412 - nnu:104605588 1055.05